ggKbase home page

S_p1_S3_coassembly_k141_1855662

Search features with annotation key words

Displaying items 31-60 of 386 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p1_S3_coassembly_k141_1855662_30
unknown

Not on your lists

comp(31812..31991)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1855662_31
unknown

Not on your lists

32100..32192
-----------------
DNA (93bp)
protein (31aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1855662_32
unknown

Not on your lists

comp(32195..34216)
-----------------
DNA (2022bp)
protein (674aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1855662_33
R_OP11_Gottesmanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

34587..36278
-----------------
DNA (1692bp)
protein (564aa)
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_40_13_curated
S_p1_S3_coassembly_k141_1855662_34
R_OP11_Gottesmanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

36285..41000
-----------------
DNA (4716bp)
protein (1572aa)
RNA polymerase sigma factor SigA Tax=Chloroflexus aggregans (strain MD-66 / DSM 9485) RepID=B8GCU9_CHLAD
RpoD subfamily RNA polymerase sigma-70 subunit
Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_40_13_curated
S_p1_S3_coassembly_k141_1855662_35
unknown

Not on your lists

41064..42245
-----------------
DNA (1182bp)
protein (394aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1855662_36
RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

42373..43146
-----------------
DNA (774bp)
protein (258aa)
pseudouridine synthase, RluA family (EC:3.2.1.17); K06179 ribosomal large subunit pseudouridine synthase C [EC:5.4.99.12] bin=ACD57 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=ACD57 organism_group=OP11 (Microgenomates) organism_desc=OP11
pseudouridine synthase
Tax=RIFOXYC2_FULL_OP11_Curtissbacteria_41_11_curated
S_p1_S3_coassembly_k141_1855662_37
RHI_OP11_Daviesbacteria_43_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

43998..45551
-----------------
DNA (1554bp)
protein (518aa)
Recombinase bin=GWA1_ZB2_49_26 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
recombinase
Tax=RIFCSPHIGHO2_12_FULL_OP11_Daviesbacteria_43_11_curated
S_p1_S3_coassembly_k141_1855662_trna_9
unknown

Not on your lists

comp(45502..45731)
-----------------
DNA (230bp)
transferRNA Thr
S_p1_S3_coassembly_k141_1855662_38
GWA1_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(45695..46525)
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ80308.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_38_7.;"
id=3506554 bin=GWC1_OD1_38_17 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
S_p1_S3_coassembly_k141_1855662_trna_8
unknown

Not on your lists

comp(46581..46654)
-----------------
DNA (74bp)
transferRNA Thr
S_p1_S3_coassembly_k141_1855662_39
R_OP11_Gottesmanbacteria_39_12, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

47138..48313
-----------------
DNA (1176bp)
protein (392aa)
major facilitator superfamily MFS_1 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
major facilitator superfamily protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Gottesmanbacteria_39_12_curated
S_p1_S3_coassembly_k141_1855662_40
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(48302..48937)
-----------------
DNA (636bp)
protein (212aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Uncharacterized protein {ECO:0000313|EMBL:KKR41805.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
hypothetical protein
S_p1_S3_coassembly_k141_1855662_41
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

48955..49209
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
S_p1_S3_coassembly_k141_1855662_42
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(49206..49841)
-----------------
DNA (636bp)
protein (212aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Uncharacterized protein Tax=uncultured bacterium RepID=K2BXD7_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_43
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(49922..50437)
-----------------
DNA (516bp)
protein (172aa)
peptide deformylase (EC:3.5.1.88); K01462 [EC:3.5.1.88] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Peptide deformylase {ECO:0000313|EMBL:KKQ81166.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
hypothetical protein
S_p1_S3_coassembly_k141_1855662_44
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(50460..50720)
-----------------
DNA (261bp)
protein (87aa)
Putative uncharacterized protein Tax=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 RepID=B0KVC1_9BACT bin=ACD38 species=uncultured candidate division WWE3 bacterium EJ0ADIGA11YD11 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_45
GWC2_OP11_40_12, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(50717..52789)
-----------------
DNA (2073bp)
protein (691aa)
Uncharacterized protein {ECO:0000313|EMBL:KKR41809.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWC2_40_12.;"
TPR repeat-containing protein bin=ACD30 species=ACD30 genus=ACD30 taxon_order=ACD30 taxon_class=ACD30 phylum=OP11 tax=ACD30 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
S_p1_S3_coassembly_k141_1855662_46
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

52806..54185
-----------------
DNA (1380bp)
protein (460aa)
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_47
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(54224..56017)
-----------------
DNA (1794bp)
protein (598aa)
cation transport P-type ATPase (EC:3.6.3.-); K01552 [EC:3.6.3.-] bin=ACD28 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
heavy metal-translocating P-type ATPase
Tax=CG_Levy_01
S_p1_S3_coassembly_k141_1855662_48
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

56087..57151
-----------------
DNA (1065bp)
protein (355aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DWX6_9BACT
Rod shape-determining protein mreB {ECO:0000313|EMBL:KKQ81137.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_7.;"
rod shape-determining protein MreB
S_p1_S3_coassembly_k141_1855662_49
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

Not on your lists

57331..57777
-----------------
DNA (447bp)
protein (149aa)
ppaX; pyrophosphatase PpaX (EC:3.6.1.1); K06019 pyrophosphatase PpaX [EC:3.6.1.1] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
ppaX; Pyrophosphatase PpaX (EC:3.6.1.1)
Pyrophosphatase PpaX {ECO:0000313|EMBL:KKQ75815.1}; species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWB1_38_5b.;"
S_p1_S3_coassembly_k141_1855662_50
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

57802..58869
-----------------
DNA (1068bp)
protein (356aa)
blb:BBMN68_1523 pyrD3; PyrD3 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
dihydroorotate oxidase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_51
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(58875..59522)
-----------------
DNA (648bp)
protein (216aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
pyrE; hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_52
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(59515..60279)
-----------------
DNA (765bp)
protein (255aa)
Orotidine 5'-phosphate decarboxylase Tax=uncultured bacterium RepID=K2CHH7_9BACT
orotidine 5'-phosphate decarboxylase
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_53
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

60354..61142
-----------------
DNA (789bp)
protein (263aa)
rod shape-determining protein MreC; K03570 rod shape-determining protein MreC bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
rod shape-determining protein MreC
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_54
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

61148..61591
-----------------
DNA (444bp)
protein (148aa)
transmembrane_regions 7..29 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_55
R_OP11_Daviesbacteria_36_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

61617..63461
-----------------
DNA (1845bp)
protein (615aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Uncharacterized protein Tax=uncultured bacterium RepID=K2DFQ0_9BACT
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated
S_p1_S3_coassembly_k141_1855662_56
unknown

Not on your lists

63498..64205
-----------------
DNA (708bp)
protein (236aa)

This feature has no annotations

S_p1_S3_coassembly_k141_1855662_57
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

64202..65290
-----------------
DNA (1089bp)
protein (363aa)
DNA protecting protein DprA; K04096 DNA processing protein bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
DNA protecting protein DprA
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
Displaying items 31-60 of 386 in total

View Taxonomy