ggKbase home page

S_p1_S3_coassembly_k141_1818500_266

Organism: S_p1_S3_coassembly_Daviesbacteria_37_444

near complete RP 42 / 55 BSCG 46 / 51 ASCG 9 / 38 MC: 1
Location: 229859..230950

Top 3 Functional Annotations

Value Algorithm Source
adg:Adeg_1726 RNA polymerase, sigma 70 subunit, RpoD subfamily; K03086 RNA polymerase primary sigma factor bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 363.0
  • Bit_score: 657
  • Evalue 4.10e-186
RpoD family RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 367.0
  • Bit_score: 438
  • Evalue 1.40e-120
Tax=RIFCSPLOWO2_02_FULL_OP11_Daviesbacteria_36_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 94.2
  • Coverage: 363.0
  • Bit_score: 671
  • Evalue 6.50e-190

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_OP11_Daviesbacteria_36_7 → Daviesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1092
ATGGCTAAACAAAGAAAACAAACAACACTAGATATTAAAAAGCTTCTTAAATTAGGTAAAGACAGAGGCTTTGTTACCCAAGAGGAAATTTTACAGATTTTCCCTAAACCAGAAGAAGTAATCCCAGCTTTGGATGAGTTTTATATTCAATTAATTGATGCCAGTATTGATGTATTTGAAAGCACAGCAGAAGAGCTGGAAGCTGAAACTAAATCTCCTTCCGATTTGGAAAAAGAATTAGAGGTTTTAACTACTTTAGAGGGAGGTTCTGTTACAGATCCTGTTAGACAATATCTTCGTGATATTGGTAAGATCCCACTTCTAACAGCCCAAGATGAAATTGAGCTTGCCAAAAAAGCAGAAAAAAATGATCAACCCTCTAGAGATAAATTGATTAGCGCTAACTTGCGTTTAGTTGTCTCTATAGCCAAAAAGTATGTAGGAAGAGGAATGAGCTTGCTCGATTTAATTGAAGAGGGGAATATTGGTTTGATGAGAGCAGTAGACAAATATGACTGGAGAAGGGGTTATAAATTTTCCACTTATGCCACTTGGTGGATCAGGCAAGCTATCACCAGGGCAATTGCTGATCAGGCAAGAACTATTAGAATTCCTGTTCATATGGTAGAAACTATCAATAGATTCAATAGAACTCAAAGAAGGTTAATGCAGGAGCTAGGCAGAGAACCTGCCCCAGAAGAAGTAGCCAAAGCTTTAGGGATTGATGAAAGTAAAGCCAGGGAAATTATTAAAGTTTCCCAAGAGCCTACTTCTTTGGAAACTCCTGTTGGAGATGAGGAAGATTCTCATTTAGGGGATTTTATTGCTGACCAAGGCTTGCAGCCAGATGAGCAGGCTACAAGAGAGCTTTTAAAGATTCATTTAGATGAGGTGCTGGATAGTCTCTCTCCTAGAGAAAAAAGAGTATTACAGCTCAGGTTTGGTCTAGAAGATGGTAAACAAAGAACATTAGAAGAAGTAGGCAAAGAATTTGGAGTTACTAGAGAAAGAATTAGACAAATTGAAGCCAAAGCTATTAGAAAATTAAAACATCCCACCAGAGCAAAAAAACTTCGGGATTATCTAGAATAG
PROTEIN sequence
Length: 364
MAKQRKQTTLDIKKLLKLGKDRGFVTQEEILQIFPKPEEVIPALDEFYIQLIDASIDVFESTAEELEAETKSPSDLEKELEVLTTLEGGSVTDPVRQYLRDIGKIPLLTAQDEIELAKKAEKNDQPSRDKLISANLRLVVSIAKKYVGRGMSLLDLIEEGNIGLMRAVDKYDWRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINRFNRTQRRLMQELGREPAPEEVAKALGIDESKAREIIKVSQEPTSLETPVGDEEDSHLGDFIADQGLQPDEQATRELLKIHLDEVLDSLSPREKRVLQLRFGLEDGKQRTLEEVGKEFGVTRERIRQIEAKAIRKLKHPTRAKKLRDYLE*