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ACD1_4_12

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: 16032..16769

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 47.8
  • Coverage: 228.0
  • Bit_score: 208
  • Evalue 2.80e-51
PSI_RSU (db=PatternScan db_id=PS01149 from=109 to=123 evalue=0.0 interpro_id=IPR018496 interpro_description=Pseudouridine synthase, RsuA and RluB/E/F, conserved site GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: intramolecular transferase activity (GO:0016866)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE B (db=HMMPanther db_id=PTHR21600 from=18 to=238 evalue=7.6e-60) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.60e-60

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 738
ATGGAAAAAAAGCCTCAATCAAACGAAATAACCTGGCCAATGCGCATTAACCGCTTTCTGGCCATAAATGACTATGCATCACGTAGAGAGGCAGATGCCCTCGTGCTTAAAGGTGTGGTTAAAATCAATGGAAAAAAGGCGAAAATAGGCGATAAGGTCAATGAGAATGACGAAGTGACGGTGAATGCTAAAGCGCAAGGAGTTGCCAAGCAGTATGTTTATTTTGCCTATCATAAGCCTCGCGGAATCGTTACGCATTCTCCGAAAGACGGACAGCGAAGCATTGCCGAAGTGACTTATACCGCTAGCGATGTGTTTCCAATTGGGCGTTTGGATAAAAATTCTCGCGGGTTGATCATACTTTCAAATGACGGAAGAATTACTGACAAACTGCTTAATCCCGAGCGTGAACACGAAAAAGAATATGTAGTGACAGTCAATAAGCCGATAACGAATATTTTTCTCAAGGTGATGCGGCAAGGTGTGCAGTTGGAAGATTTCAAAACAAGAGAATGCATCGTTGAGAAAACTAATGATACGACTTTTCATATTGTGCTAACAGAGGGTAAGAAGCATCAGATTAGGCGCATGTGTACAGCACTTGGTTGGGAGGTAGTGGATTTGAAACGAATTCGCATTATGAATGTTAAATTAGAAAAACTTCCAGTCGGCCAGCAGCGAAAAATAGTCGGCGATGAATTAGAAAAACTCTTAAGTAGTCTCGGTATAAAAAAATAG
PROTEIN sequence
Length: 246
MEKKPQSNEITWPMRINRFLAINDYASRREADALVLKGVVKINGKKAKIGDKVNENDEVTVNAKAQGVAKQYVYFAYHKPRGIVTHSPKDGQRSIAEVTYTASDVFPIGRLDKNSRGLIILSNDGRITDKLLNPEREHEKEYVVTVNKPITNIFLKVMRQGVQLEDFKTRECIVEKTNDTTFHIVLTEGKKHQIRRMCTALGWEVVDLKRIRIMNVKLEKLPVGQQRKIVGDELEKLLSSLGIKK*