ggKbase home page

ACD1_17_27

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(21245..21445)

Top 3 Functional Annotations

Value Algorithm Source
Probable cold shock protein scoF n=1 Tax=Blastopirellula marina DSM 3645 RepID=A3ZQQ8_9PLAN (db=UNIREF evalue=2.0e-13 bit_score=78.2 identity=58.73 coverage=91.044776119403) similarity UNIREF
DB: UNIREF
  • Identity: 58.73
  • Coverage: 91.04
  • Bit_score: 78
  • Evalue 2.00e-13
cold shock protein scoF similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 64.0
  • Bit_score: 77
  • Evalue 2.00e-12
COLD_SHOCK (db=PatternScan db_id=PS00352 from=14 to=33 evalue=0.0 interpro_id=IPR019844 interpro_description=Cold-shock conserved site) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_36_108 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 201
ATGTCACAAGGAACAATCAAAAGATTGACTGATCGTGGATTCGGATTCATTGCCCAAGAGGGTTCTGATAAGGATCTTTTCTTCCATGCCAAAGAACTGCAAAACGCAGAATTCAATGAAATGAAAGAAGGCGACCGTGTTGAATTCGAAGTTAGCGAAAGCCCGAAAGGACCTTGCGCTATCAACGTTTCACGCATCTAA
PROTEIN sequence
Length: 67
MSQGTIKRLTDRGFGFIAQEGSDKDLFFHAKELQNAEFNEMKEGDRVEFEVSESPKGPCAINVSRI*