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ACD1_23_1

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: comp(564..1457)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis protein flha similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 232.0
  • Bit_score: 229
  • Evalue 1.10e-57
transmembrane_regions (db=TMHMM db_id=tmhmm from=269 to=291) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=147 to=164) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

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Notes

All domains are type III secretion Jill Banfield (11/15/12)

Taxonomy

BJP_IG2103_ACD39_50_23 → ACD39 → Bacteria

Sequences

DNA sequence
Length: 894
ATGGGCCATTTCATACTACTGAATGTCATAACTGGGCATGAAACGAAAAGGCATGGTTTGGCCAAGCTGGTTTCACTTCTGCACGCTACTTTAAGCGAAGAAGCAGTTGCCAAGTGTCTTAAAAAGGAGAAGCTTTTAGTGGATACCAATAACAAGAGGTTTTTTGAGTTACTATTGCAATGCTTAAATATAATTTTTCCGCCGTCGATTTTAAACGTGTTTTTGACTCTGATTATGGCTTTTTCGCTGGTAATTCTACTGGCCTCCATTTGCAAAAAAGGAATGTTTGAATTTTCCTTTTACCCTGATTTGTTGCTTATTCTAACTCTTTTCAGATTATCGCTGAATATCAGCTTAACATGTATAATCCTCGCCGGTCGCGGTGCAACTATCGACATAATAACGTTTTTCGGGAACTTCGCTGTTGGCATCAATTCTGTCGTTGCTATAGTCATATTTGCAATTCTAGTGCTTGTTCAGTTCATAGTAATCACAAAATGTGGCGAACGCGTAGCCGAAGTAGCTGCACGCTTCACTCTTGATGCGATGCCACTTAGATGCATGGCAATAGATGAGGACCTCAATACCGGCGTAATAGATCAGGATGAAGCTACCAGGCGCAGACTCGATATTAACCGTAAAGCCAACTTCTGCGGTTCTATGGACGGTGCGAGTAAGTTTATTAAAAACGACGCAATCATGAGCATCATAATCACAATTATCCTGTTCGGCGGTATGGCTATGGGCGTTTTTCTGAGTAGTGAATCTGCAGCTGATACGCTGCAAACATCCGTTCTGTTAGCTATTGGCGCTGGTCTGGTTATTCATATTCCGGCTCTGATAATTGCCACAGCAACAGTGTTGATTGTTACCAGAATGGTATCTGATTCTTAA
PROTEIN sequence
Length: 298
MGHFILLNVITGHETKRHGLAKLVSLLHATLSEEAVAKCLKKEKLLVDTNNKRFFELLLQCLNIIFPPSILNVFLTLIMAFSLVILLASICKKGMFEFSFYPDLLLILTLFRLSLNISLTCIILAGRGATIDIITFFGNFAVGINSVVAIVIFAILVLVQFIVITKCGERVAEVAARFTLDAMPLRCMAIDEDLNTGVIDQDEATRRRLDINRKANFCGSMDGASKFIKNDAIMSIIITIILFGGMAMGVFLSSESAADTLQTSVLLAIGAGLVIHIPALIIATATVLIVTRMVSDS*