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ACD1_46_4

Organism: ACD1

near complete RP 51 / 55 MC: 12 BSCG 49 / 51 MC: 2 ASCG 0 / 38
Location: 3326..3958

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 81.0
  • Bit_score: 89
  • Evalue 9.50e-16
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=134 to=191 evalue=7.3e-21 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.30e-21
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=133 to=209 evalue=1.8e-20 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.80e-20

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Taxonomy

RBG_13_RIF03_48_7_curated → RIF3 → Bacteria

Sequences

DNA sequence
Length: 633
ATGTGGCAAGATGAAGAAGCTTATATGAAATTTTTGATTGATTTCGGAGTCGAAAAGAGTGTCGTTTCAGAGGTTTTTTTAAAATCTCGTTATCACAACCAACAAAAAATCCATGCGGCAATCAATGTTGTTAACAAACTATTGAAATCATTACCTCCATCACTAGGTGAAATTCCACGCCACCCTTTTGATATCATGCGCTTACGTTATGGACTTTATATGGATCATGGATGGAAAAAGTTTACACTCAAGGAAATGGGACGCATTTATTGCATCTCCGGAACTATGATCGATTTTAACATCAAAAAAATCTGGCAATTCCTTCACAAACGAGAGAATAAAAGACAGTTAATGGAACTTTTTTATCCACCTATTCAGCCTTTAAAGAATCTGGGTTTCGAAGAAAAACTTAATCGCTCCGTTGATGAGCTTGAACTCTCGGTTAGATCAACAAATTGCCTTATTCAAGGTAACATTCTCACGATTGAAGACCTTGTTCAAAAAAGAGAAGCTCAGCTTCTTAAAATGCCAAATTTAGGCAGAAATTCTCTTCATGAAATCAGAAATGCACTCTTTGAAATCGAATTGACCCTGGGAATGAAGCTCGAAACATATGATGCCGATATTAAATAA
PROTEIN sequence
Length: 211
MWQDEEAYMKFLIDFGVEKSVVSEVFLKSRYHNQQKIHAAINVVNKLLKSLPPSLGEIPRHPFDIMRLRYGLYMDHGWKKFTLKEMGRIYCISGTMIDFNIKKIWQFLHKRENKRQLMELFYPPIQPLKNLGFEEKLNRSVDELELSVRSTNCLIQGNILTIEDLVQKREAQLLKMPNLGRNSLHEIRNALFEIELTLGMKLETYDADIK*