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ACD22_31

Alias: ACD22_55444.16566.10

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD22_31_1
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

1..585
DNA (585bp) protein (195aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=134 to=156)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=97)
transmembrane_regions (db=TMHMM db_id=tmhmm from=49 to=71)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=185)
ACD22_31_2
RIFOXYC1_FULL_WWE3_42_13_curated, WWE3, Bacteria

Not on your lists

722..1303
DNA (582bp) protein (194aa)
seg (db=Seg db_id=seg from=92 to=108)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=161)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
transmembrane_regions (db=TMHMM db_id=tmhmm from=75 to=109)
ACD22_31_3
GWB1_WWE3_41_6, WWE3, Bacteria

Not on your lists

1764..2126
DNA (363bp) protein (121aa)
conserved protein of unknown function
HISTIDINE TRIAD (HIT) PROTEIN (db=HMMPanther db_id=PTHR23089 from=17 to=113 evalue=7.9e-08 interpro_id=IPR001310 interpro_description=Histidine triad (HIT) protein)
HIT-like (db=superfamily db_id=SSF54197 from=2 to=108 evalue=1.1e-16 interpro_id=IPR011146 interpro_description=Histidine triad-like motif GO=Molecular Function: catalytic activity (GO:0003824))
no description (db=Gene3D db_id=G3DSA:3.30.428.10 from=6 to=108 evalue=5.3e-14 interpro_id=IPR011151 interpro_description=Histidine triad motif GO=Molecular Function: catalytic activity (GO:0003824))
ACD22_31_4

Not on your lists

comp(2658..3383)
DNA (726bp) protein (242aa)
2658..3383 - (rbs_motif=ATAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99696.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_5

Not on your lists

comp(3380..3640)
DNA (261bp) protein (87aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
Uncharacterized protein {ECO:0000313|EMBL:EKD99697.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_6

Not on your lists

comp(3922..4242)
DNA (321bp) protein (107aa)
Terminase_2 (db=HMMPfam db_id=PF03592 from=5 to=63 evalue=4.3e-12 interpro_id=IPR005335 interpro_description=Terminase small subunit GO=Biological Process: DNA packaging (GO:0006323))
Uncharacterized protein {ECO:0000313|EMBL:EKD99689.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_7

Not on your lists

4310..4813
DNA (504bp) protein (168aa)
hypothetical protein cdivTM_07089 n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI00017427A7 (db=UNIREF evalue=1.0e-17 bit_score=92.0 identity=37.25 coverage=86.3095238095238)
hypothetical protein
DUF955 (db=HMMPfam db_id=PF06114 from=40 to=162 evalue=8.0e-24 interpro_id=IPR010359 interpro_description=Protein of unknown function DUF955)
Uncharacterized protein {ECO:0000313|EMBL:EKD99690.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_8

Not on your lists

4810..5184
DNA (375bp) protein (125aa)
coiled-coil (db=Coil db_id=coil from=14 to=49 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=91 to=113)
Uncharacterized protein {ECO:0000313|EMBL:EKD99691.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_9

Not on your lists

5345..5572
DNA (228bp) protein (76aa)
5345..5572 + (rbs_motif=TAA rbs_spacer=10bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99692.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_10

Not on your lists

5639..7519
DNA (1881bp) protein (627aa)
integrase
seg (db=Seg db_id=seg from=273 to=286)
coiled-coil (db=Coil db_id=coil from=420 to=441 evalue=NA)
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=16 to=24 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
ACD22_31_11

Not on your lists

7513..9045
DNA (1533bp) protein (511aa)
N-6 DNA methylase
N-6 DNA methylase
Type I restriction-modification system, M subunit n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJW4_9AQUI (db=UNIREF evalue=5.0e-158 bit_score=561.0 identity=57.14 coverage=92.3679060665362)
seg (db=Seg db_id=seg from=412 to=423)
ACD22_31_12

Not on your lists

9042..10244
DNA (1203bp) protein (401aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=161 to=189 evalue=NA)
DNA methylase specificity domain (db=superfamily db_id=SSF116734 from=2 to=190 evalue=3.3e-43)
DNA methylase specificity domain (db=superfamily db_id=SSF116734 from=195 to=399 evalue=2.6e-31)
ACD22_31_13
RifOxyA12_full_Lentisphaerae_48_11_curated, Lentisphaerae, Bacteria

Not on your lists

10237..12495
DNA (2259bp) protein (753aa)
Type I site-specific deoxyribonuclease, HsdR family n=1 Tax=NC10 bacterium 'Dutch sediment' RepID=D5MIL3_9BACT (db=UNIREF evalue=0.0 bit_score=810.0 identity=56.28 coverage=91.3678618857902)
type I site-specific deoxyribonuclease, HsdR family
type I site-specific deoxyribonuclease, HsdR family
seg (db=Seg db_id=seg from=721 to=733)
ACD22_31_14

Not on your lists

12474..13196
DNA (723bp) protein (241aa)
hsdR; type I restriction enzyme, R subunit (EC:3.1.21.3)
seg (db=Seg db_id=seg from=119 to=139)
type I site-specific deoxyribonuclease, HsdR family; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] alias=ACD22_55444.16566.10_14,ACD22_55444.16566.10G0014,ACD22_C00031G00014 id=22844 tax=ACD22 species=Prosthecochloris aestuarii genus=Prosthecochloris taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi organism_group=WWE3 organism_desc=WWE3
Uncharacterized protein {ECO:0000313|EMBL:EKD99684.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_15

Not on your lists

13189..13506
DNA (318bp) protein (106aa)
putative metal-dependent hydrolase
seg (db=Seg db_id=seg from=90 to=102)
DUF45 (db=HMMPfam db_id=PF01863 from=6 to=100 evalue=6.1e-24 interpro_id=IPR002725 interpro_description=Protein of unknown function DUF45)
protein of unknown function DUF45; K07043 alias=ACD22_55444.16566.10G0015,ACD22_55444.16566.10_15,ACD22_C00031G00015 id=22851 tax=ACD22 species=unknown genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria organism_group=WWE3 organism_desc=WWE3
ACD22_31_16

Not on your lists

13490..13948
DNA (459bp) protein (153aa)
13490..13948 + (rbs_motif=TAA rbs_spacer=3bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99686.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD22_31_17

Not on your lists

13945..16026
DNA (2082bp) protein (694aa)
hypothetical protein (db=KEGG evalue=3.0e-16 bit_score=90.9 identity=25.49 coverage=77.9538904899135)
seg (db=Seg db_id=seg from=128 to=142)
seg (db=Seg db_id=seg from=281 to=296)
hypothetical protein alias=ACD22_55444.16566.10G0017,ACD22_55444.16566.10_17,ACD22_C00031G00017 id=22854 tax=ACD22 species=Dictyoglomus thermophilum genus=Dictyoglomus taxon_order=Dictyoglomales taxon_class=Dictyoglomia phylum=Dictyoglomi organism_group=WWE3 organism_desc=WWE3
ACD22_31_18

Not on your lists

16150..16485
DNA (336bp) protein (112aa)
16150..16485 + (rbs_motif=ATAA rbs_spacer=4bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD99688.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 18 items

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