ggKbase home page

ACD25_38

Alias: ACD25_328938.4515.6

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD25_38_1
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

3..203
DNA (201bp) protein (67aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=32)
hypothetical protein
Putative uncharacterized protein Tax=GWD2_WWE3_42_34
ACD25_38_2
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

215..652
DNA (438bp) protein (146aa)
seg (db=Seg db_id=seg from=118 to=129)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
hypothetical protein
Tax=GWD2_WWE3_42_34
ACD25_38_3

Not on your lists

621..1067
DNA (447bp) protein (149aa)
621..1067 + (rbs_motif=None rbs_spacer=None)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB40383.1}; TaxID=1394710 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium RAAC2_WWE3_1.;"
ACD25_38_4

Not on your lists

1136..2167
DNA (1032bp) protein (344aa)
hypothetical protein
Tfp pilus assembly protein, ATPase PilM (db=HMMPIR db_id=PIRSF019169 from=1 to=343 evalue=2.4e-64 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
pilM: type IV pilus assembly protein PilM (db=HMMTigr db_id=TIGR01175 from=1 to=343 evalue=5.5e-52 interpro_id=IPR005883 interpro_description=Type IV pilus assembly protein PilM)
Competence_A (db=HMMPfam db_id=PF11104 from=43 to=168 evalue=9.1e-26)
ACD25_38_5

Not on your lists

2168..2743
DNA (576bp) protein (192aa)
coiled-coil (db=Coil db_id=coil from=53 to=74 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=23 to=45)
PilN (db=HMMPfam db_id=PF05137 from=4 to=145 evalue=6.2e-09 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
hypothetical protein
ACD25_38_6
GWD2_WWE3_42_34, WWE3, Bacteria

Not on your lists

comp(3691..4359)
DNA (669bp) protein (223aa)
tRNA (guanine-N(1)-)-methyltransferase
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Bacillus halodurans RepID=TRMD_BACHD (db=UNIREF evalue=1.0e-55 bit_score=219.0 identity=48.64 coverage=94.6188340807175)
trmD: tRNA (guanine-N1)-methyltransferase (db=HMMTigr db_id=TIGR00088 from=2 to=219 evalue=4.4e-95 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
tRNA-(m1G37) methyltransferase (db=HMMPIR db_id=PIRSF000386 from=1 to=220 evalue=2.9e-91 interpro_id=IPR002649 interpro_description=tRNA (guanine-N1-)-methyltransferase, bacteria GO=Molecular Function: RNA binding (GO:0003723), Biological Process: tRNA processing (GO:0008033), Molecular Function: tRNA (guanine-N1-)-methyltransferase activity (GO:0009019))
ACD25_38_7
RIFOXYD2_FULL_WWE3_43_10_curated, WWE3, Bacteria

Not on your lists

comp(4346..4549)
DNA (204bp) protein (68aa)
seg (db=Seg db_id=seg from=4 to=18)
KH_1 (db=HMMPfam db_id=PF00013 from=20 to=49 evalue=3.1e-06 interpro_id=IPR018111 interpro_description=K Homology, type 1, subgroup GO=Molecular Function: RNA binding (GO:0003723))
KH_TYPE_1 (db=ProfileScan db_id=PS50084 from=16 to=67 evalue=9.854 interpro_id=IPR004088 interpro_description=K Homology, type 1 GO=Molecular Function: RNA binding (GO:0003723))
KH domain-containing protein; K06960 Tax=RIFOXYD2_FULL_WWE3_43_10_curated
Displaying 7 items

View Taxonomy