ggKbase home page

SCNpilot_cont_500_bf_scaffold_147_11

Organism: SCNPILOT_CONT_500_P_TM7_47_87

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 11 / 38 MC: 2
Location: comp(8799..9143)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, HxlR family n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8ED63_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 94.0
  • Bit_score: 89
  • Evalue 2.40e-15
HxlR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 44.7
  • Coverage: 94.0
  • Bit_score: 89
  • Evalue 7.50e-16
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:AEI46711.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 94.0
  • Bit_score: 89
  • Evalue 3.40e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 345
ATGCCTGATGATCTTAGCTCTCTGCGTCTAGTCGCCACTACCCTTGCTGGTAAGTGGACTCTCCCGGTTGTTTATTCACTTAAAGACAATACTCGTCGCTATCATGAAATCCGTCGCCATTTTCCAAAGGCGACCGAGAAAATGATTATCGCTACACTCAAGAAGCTGGAGAAAGATGGACTGGTCAAGCGCCGCATCTATCCAACCGTACCTCCAAAAACCGAATATACTTTGACACCGTTAGGTTTTGAAGTCCTTGCCATAGCCCAATCAGCCAATGCACTAGCCAAAGCTAGTACCGCCATTGAATCACTGAAAGAGGCCCGCGGCGGCCTCTTTTCATAG
PROTEIN sequence
Length: 115
MPDDLSSLRLVATTLAGKWTLPVVYSLKDNTRRYHEIRRHFPKATEKMIIATLKKLEKDGLVKRRIYPTVPPKTEYTLTPLGFEVLAIAQSANALAKASTAIESLKEARGGLFS*