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gwa1_scaffold_137_23

Organism: GWA1_OD1_47_10

near complete RP 38 / 55 MC: 3 BSCG 42 / 51 MC: 2 ASCG 8 / 38 MC: 3
Location: comp(19058..20245)

Top 3 Functional Annotations

Value Algorithm Source
sigA; RNA polymerase major sigma-43 factor (sigma-A) Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_10_46_25_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 395.0
  • Bit_score: 776
  • Evalue 2.00e-221
RpoD subfamily RNA polymerase sigma-70 KEGG
DB: KEGG
  • Identity: 51.6
  • Coverage: 382.0
  • Bit_score: 354
  • Evalue 3.90e-95
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 354
  • Evalue 4.00e+00

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Taxonomy

R_RIF_OD1_10_46_25 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGACAAAGAAGAAAACACAAAAGAATAAGAAAGGCAAAAAAACTCTCAAAAAAAGAGTAAACAAAATTTCTAAGAAGAAACCGGCCAAGAAGCCGAAGACGAAGAATACCAAGAAGAAGGTTGACGACGCGTTGAGAACGGAACGTCTGATTGCTCGCGGCAAGGAGCGTGGCTTCGTCACCTATGACGAGATTTTGCGCGAATTCCCGACCATCGAAACTGACATCATGTTCCTCGACGAGCTCTATGAGAAACTCGCTAAGCTCGGCATAGACGTGCTTGAGGGCGGAGGACTTCTCGAGATTCCGGAAGAAGAGCCGAAGAGTAAGTATGCCTATTCACGCTCCGATTCTTCCTACGATTCAATCCAAATGTATTTGCGGGAAATCGGTCAGTATCCGCTTATTGCCGGCTCGATGGAGAAGGAGTTGGCTCGCCGCATCGAGAAGGGCGACCTCGATGCCAAGAATTTGCTCATGAAGGCAAACCTGCGTTTGGTAGTCTCCATCGCCAAGAAGTATGCGAACCGTAGTCCCGACCTTACGCTTCTCGACCTCATCCAGGAAGGAAATTTAGGCCTCCACAAGGCGGTGGAGAAATTCGACTGGACCAAGGGGTTCAAATTCTCGACATATGCCACATGGTGGATTCGCCAGGCCATTACCCGCGCTCTTGCCGACCAGAGTCGCACCATCCGCGTGCCGGTGCACATGGTGGAAACTATCGCCAAATACAAACAAGTTGTCCGTCGTCTCACTCAAGACCTCGGTCGTGAGCCCTTGCAGGAAGAAATTGCCATGGAGATGAATCTCGACGTGGACAAGATTTACCAGATAGAGAAAATCGACCAATCCACAGTATCCCTCGAATCTCCGGTGGGGGAGGATGGCGATGATGGCAAGAGTAAGCTCGGAGACTTCCTCGCTGATGACAAGATTCTCTCGCCCGACATGAATTCCTCGCGTCGCATCGTTTCCGACCAGGTCAAAGAAATTTTAAATGACCTGCCGCCCAAAGAGAGGAAGATTCTGGAGATGCGCCACGGTCTGCTTGATGGCTATACTCACACACTTGAAGAAGTCGGTCGTGTCTTCGGCGTCACTCGCGAACGCATTCGCCAAATCGAAGCCAAAGCGCATGAGAAGATAAGGCAACATGAAAAGATTGATAGATTGAGGGGGTATTAA
PROTEIN sequence
Length: 396
MTKKKTQKNKKGKKTLKKRVNKISKKKPAKKPKTKNTKKKVDDALRTERLIARGKERGFVTYDEILREFPTIETDIMFLDELYEKLAKLGIDVLEGGGLLEIPEEEPKSKYAYSRSDSSYDSIQMYLREIGQYPLIAGSMEKELARRIEKGDLDAKNLLMKANLRLVVSIAKKYANRSPDLTLLDLIQEGNLGLHKAVEKFDWTKGFKFSTYATWWIRQAITRALADQSRTIRVPVHMVETIAKYKQVVRRLTQDLGREPLQEEIAMEMNLDVDKIYQIEKIDQSTVSLESPVGEDGDDGKSKLGDFLADDKILSPDMNSSRRIVSDQVKEILNDLPPKERKILEMRHGLLDGYTHTLEEVGRVFGVTRERIRQIEAKAHEKIRQHEKIDRLRGY*