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04302015_20_Parcubacteria_58_5

In projects: 04302015_20  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Parcubacteria  →  Bacteria

Metagenomic Context

Parent: 04302015_20_UNK

Properties

Avg. coverage: 4.62 Longest contig: 8.65 Kbp Bin length: 554.67 Kbp GC content: 57.51 %
Contigs count: 320 Features count: 777 rRNAs count: 0 tRNAs count: 0

Genome completeness

partial RP 28 / 55 MC: 9 BSCG 30 / 51 MC: 11 ASCG 7 / 38 MC: 3

Description

megabin, was separated but then recombined because unclear on ESOM due to fragmentation

Displaying items 151-200 of 320 in total
contig # features sequence size GC content (%) Cov Coding Density (%) notes
04302015_20_scaffold_17078
Species: Parcubacteria bacterium GW2011_GWF2_40_69 (50%)
2 1013 bp 63.57 3.55 95.06
04302015_20_scaffold_16194
Species: R_OD1_Kaiserbacteria_55_19 (50%)
2 1048 bp 59.83 3.29 97.61
04302015_20_scaffold_13244
Species: R_OD1_Uhrbacteria_60_10 (50%)
2 1205 bp 59.25 3.24 79.92
04302015_20_scaffold_16207
Species: R_OD1_Kaiserbacteria_55_19 (50%)
2 1047 bp 55.59 2.87 99.43
04302015_20_scaffold_12089
Species: RIFOXYC2_FULL_RIF_OD1_09_47_9_curated (50%)
2 1285 bp 60.23 4.20 95.49
04302015_20_scaffold_14250
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1143 bp 61.85 2.89 91.08
04302015_20_scaffold_6834
Species: Parcubacteria bacterium GW2011_GWC2_49_9 (50%)
2 1992 bp 61.19 3.01 88.86
04302015_20_scaffold_9674
Species: Parcubacteria bacterium GW2011_GWA2_47_9 (50%)
2 1517 bp 41.53 4.75 99.87
04302015_20_scaffold_9419
Species: RIFOXYC1_FULL_RIF_OD1_06_38_18_curated (50%)
2 1549 bp 54.03 2.81 88.90
04302015_20_scaffold_13259
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (100%)
2 1204 bp 59.47 2.74 79.98
04302015_20_scaffold_10446
Species: R_OD1_Kaiserbacteria_55_17 (50%)
2 1432 bp 64.04 5.45 90.92
04302015_20_scaffold_28822
Species: R_OD1_41_19 (50%)
2 1379 bp 53.30 4.13 102.90
04302015_20_scaffold_9680
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1516 bp 58.44 3.36 99.74
04302015_20_scaffold_9937
Species: Parcubacteria bacterium GW2011_GWF2_40_69 (50%)
2 1487 bp 47.75 7.36 85.34
04302015_20_scaffold_13521
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1187 bp 61.92 5.05 96.80
04302015_20_scaffold_7550
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1848 bp 61.74 4.22 98.86
04302015_20_scaffold_17110
Species: GWB1_OD1_57_6 (50%)
2 1012 bp 57.91 3.85 103.16
04302015_20_scaffold_15388
Species: Parcubacteria bacterium GW2011_GWB1_56_8 (50%)
2 1086 bp 57.00 7.18 100.00
04302015_20_scaffold_12623
Species: R_OD1_Kaiserbacteria_55_19 (50%)
2 1247 bp 51.24 4.45 100.08
04302015_20_scaffold_14273
Species: R_OD1_Kaiserbacteria_54_22 (50%)
2 1142 bp 61.56 10.77 100.88
04302015_20_scaffold_10210
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1458 bp 60.49 4.32 96.71
04302015_20_scaffold_11771
Species: RHI_OD1_Kaiserbacteria_53_13 (50%)
2 1312 bp 55.72 4.92 94.44
04302015_20_scaffold_17378
Species: R_OD1_Kaiserbacteria_53_31 (50%)
2 1001 bp 58.44 4.05 98.90
04302015_20_scaffold_14022
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1155 bp 54.72 4.29 85.19
04302015_20_scaffold_15654
Species: Parcubacteria bacterium GW2011_GWA1_56_13 (50%)
2 1073 bp 60.67 3.22 100.09
04302015_20_scaffold_13034
Species: R_OD1_Nomurabacteria_41_12 (50%)
2 1219 bp 53.65 2.95 81.95
04302015_20_scaffold_15662
Species: Parcubacteria bacterium GW2011_GWA1_54_9 (50%)
2 1073 bp 52.94 2.52 98.42
04302015_20_scaffold_11782
Species: GWA2_OD1_44_13b (50%)
2 1311 bp 59.19 5.38 82.38
04302015_20_scaffold_10735
Species: Parcubacteria bacterium GW2011_GWA1_56_13 (50%)
2 1403 bp 61.65 3.74 98.79
04302015_20_scaffold_9714
Species: R_OD1_45_15 (50%)
2 1512 bp 56.81 7.14 81.94
04302015_20_scaffold_16254
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (100%)
2 1045 bp 62.97 3.16 98.18
04302015_20_scaffold_7838
Species: R_OD1_Kaiserbacteria_54_22 (50%)
2 1792 bp 56.92 3.68 88.23
04302015_20_scaffold_12136
Species: R_OD1_Falkowbacteria_40_23 (50%)
2 1281 bp 46.99 2.81 97.19
04302015_20_scaffold_7072
Species: RIFOXYD1_FULL_OD1_Kaiserbacteria_47_14_curated (50%)
2 1938 bp 60.99 4.41 89.01
04302015_20_scaffold_8857
Species: Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_44_26 (50%)
2 1627 bp 47.08 8.21 99.75
04302015_20_scaffold_5508
Species: RIFOXYD1_FULL_OD1_Kaiserbacteria_47_14_curated (100%)
2 2390 bp 59.92 4.39 96.78
04302015_20_scaffold_6884
Species: R_RIF_OD1_11_46_13 (50%)
2 1982 bp 53.08 4.69 100.05
04302015_20_scaffold_15678
Species: Parcubacteria bacterium GW2011_GWA1_54_9 (50%)
2 1072 bp 56.06 3.64 44.22
04302015_20_scaffold_11030
Species: R_OD1_Kaiserbacteria_55_19 (50%)
2 1375 bp 65.89 2.95 94.91
04302015_20_scaffold_11286
Species: R_RIF_OD1_09_51_10 (50%)
2 1351 bp 59.44 3.44 63.73
04302015_20_scaffold_13056
Species: RHI_RIF_OD1_07_40_12 (50%)
2 1217 bp 49.88 3.70 74.20
04302015_20_scaffold_8353
Species: R_OD1_Kaiserbacteria_49_34 (50%)
2 1712 bp 51.75 3.15 99.71
04302015_20_scaffold_15170
Species: Parcubacteria bacterium GW2011_GWF2_40_69 (50%)
2 1097 bp 46.03 4.38 94.07
04302015_20_scaffold_13316
Species: R_OD1_56_20 (50%)
2 1200 bp 52.33 3.25 67.50
04302015_20_scaffold_14053
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1154 bp 62.13 3.12 90.73
04302015_20_scaffold_15942
Species: R_OD1_Kaiserbacteria_55_19 (50%)
2 1059 bp 59.30 4.25 95.75
04302015_20_scaffold_7599
Species: GWA2_OD1_Kaiserbacteria_50_9_curated (50%)
2 1838 bp 55.77 4.00 78.84
04302015_20_scaffold_13065
Species: RifOxyC12_full_RIF_OD1_09_46_25_curated (50%)
2 1217 bp 53.08 4.31 63.60
04302015_20_scaffold_15434
Species: R_OD1_Kaiserbacteria_55_19 (50%)
2 1084 bp 59.13 4.15 75.28
04302015_20_scaffold_13069
Species: R_OD1_56_18 (50%)
2 1216 bp 49.01 2.96 97.45
Displaying items 151-200 of 320 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.