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ACD12_103

Alias: ACD12_14734.41753.14

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Displaying items 31-52 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_103_31

Not on your lists

17210..19015
DNA (1806bp) protein (602aa)
GDP-mannose 4,6 dehydratase ISS
Putative uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3D3P2_9ACTO (db=UNIREF evalue=3.0e-20 bit_score=103.0 identity=22.81 coverage=69.7674418604651)
coiled-coil (db=Coil db_id=coil from=51 to=72 evalue=NA)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
ACD12_103_32

Not on your lists

19016..19540
DNA (525bp) protein (175aa)
RecO; recombinational DNA repair protein
seg (db=Seg db_id=seg from=161 to=173)
RecO_N (db=HMMPfam db_id=PF11967 from=9 to=83 evalue=1.3e-15)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=4 to=83 evalue=8.8e-14 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD12_103_33

Not on your lists

19617..20447
DNA (831bp) protein (277aa)
hypothetical protein (db=KEGG evalue=2.0e-11 bit_score=72.8 identity=30.93 coverage=65.7039711191336)
seg (db=Seg db_id=seg from=243 to=255)
hypothetical protein alias=ACD12_14734.41753.14G0033,ACD12_14734.41753.14_33,ACD12_C00103G00033 id=4435 tax=ACD12 species=Bordetella avium genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria organism_group=OP11 organism_desc=
Uncharacterized protein {ECO:0000313|EMBL:EKE15201.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_34

Not on your lists

20679..21683
DNA (1005bp) protein (335aa)
Formyltetrahydrofolate deformylase n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XB68_METSD (db=UNIREF evalue=3.0e-103 bit_score=379.0 identity=60.21 coverage=84.4776119402985)
purU; formyltetrahydrofolate deformylase
purU; formyltetrahydrofolate deformylase
PurU: formyltetrahydrofolate deformylase (db=HMMTigr db_id=TIGR00655 from=55 to=333 evalue=2.8e-158 interpro_id=IPR004810 interpro_description=Formyltetrahydrofolate deformylase GO=Biological Process: 'de novo' IMP biosynthetic process (GO:0006189), Molecular Function: formyltetrahydrofolate deformylase activity (GO:0008864))
ACD12_103_35

Not on your lists

21705..23066
DNA (1362bp) protein (454aa)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
glyQS; Glycine--tRNA ligase (EC:6.1.1.14)
Glycyl-tRNA synthetase n=1 Tax=Thermoanaerobacter tengcongensis RepID=SYG_THETN (db=UNIREF evalue=2.0e-143 bit_score=513.0 identity=53.61 coverage=99.5594713656388)
glyS_dimeric: glycyl-tRNA synthetase (db=HMMTigr db_id=TIGR00389 from=1 to=451 evalue=1.3e-180 interpro_id=IPR002315 interpro_description=Glycyl-tRNA synthetase, alpha2 dimer GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: glycine-tRNA ligase activity (GO:0004820), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: glycyl-tRNA aminoacylation (GO:0006426))
ACD12_103_36

Not on your lists

23073..23531
DNA (459bp) protein (153aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=10 to=29)
seg (db=Seg db_id=seg from=10 to=23)
Uncharacterized protein {ECO:0000313|EMBL:EKE15204.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_37

Not on your lists


23550..23798
DNA (249bp) protein (83aa)
seg (db=Seg db_id=seg from=71 to=82)
seg (db=Seg db_id=seg from=9 to=20)
Ribosomal_S20p (db=HMMPfam db_id=PF01649 from=4 to=79 evalue=1.6e-11 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal protein S20 (db=superfamily db_id=SSF46992 from=3 to=81 evalue=2.0e-11 interpro_id=IPR002583 interpro_description=Ribosomal protein S20 GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD12_103_38

Not on your lists

23795..24322
DNA (528bp) protein (176aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
PilN (db=HMMPfam db_id=PF05137 from=6 to=161 evalue=3.4e-10 interpro_id=IPR007813 interpro_description=Fimbrial assembly)
Uncharacterized protein {ECO:0000313|EMBL:EKE15206.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_39

Not on your lists

24478..24930
DNA (453bp) protein (151aa)
seg (db=Seg db_id=seg from=57 to=68)
PilO (db=HMMPfam db_id=PF04350 from=8 to=148 evalue=1.7e-09)
Uncharacterized protein {ECO:0000313|EMBL:EKE15192.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_40

Not on your lists

24927..25112
DNA (186bp) protein (62aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKE15193.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_41

Not on your lists

25115..26446
DNA (1332bp) protein (444aa)
seg (db=Seg db_id=seg from=385 to=399)
transmembrane_regions (db=TMHMM db_id=tmhmm from=420 to=442)
seg (db=Seg db_id=seg from=422 to=441)
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
ACD12_103_42

Not on your lists

comp(27086..28135)
DNA (1050bp) protein (350aa)
cell envelope-related transcriptional attenuator
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=108 to=120)
seg (db=Seg db_id=seg from=2 to=22)
ACD12_103_43

Not on your lists

28285..30072
DNA (1788bp) protein (596aa)
ATP-dependent DNA helicase PcrA
ATP-dependent DNA helicase PcrA
ATP-dependent DNA helicase PcrA n=3 Tax=Geobacillus RepID=C5D4J1_GEOSW (db=UNIREF evalue=2.0e-137 bit_score=493.0 identity=43.26 coverage=97.6510067114094)
coiled-coil (db=Coil db_id=coil from=481 to=502 evalue=NA)
ACD12_103_44

Not on your lists

comp(30080..30235)
DNA (156bp) protein (52aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=21)
Uncharacterized protein {ECO:0000313|EMBL:EKE15183.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_45

Not on your lists

comp(30505..31125)
DNA (621bp) protein (207aa)
Putative uncharacterized protein n=2 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NWU3_9RHOB (db=UNIREF evalue=6.0e-25 bit_score=117.0 identity=36.36 coverage=98.0676328502416)
hypothetical cytosolic protein
seg (db=Seg db_id=seg from=58 to=71)
Uncharacterized protein {ECO:0000313|EMBL:EKE15184.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_46

Not on your lists

31377..31973
DNA (597bp) protein (199aa)
acetyltransferase
seg (db=Seg db_id=seg from=145 to=161)
HEXAPEP_TRANSFERASES (db=PatternScan db_id=PS00101 from=137 to=165 evalue=0.0 interpro_id=IPR018357 interpro_description=Hexapeptide transferase, conserved site GO=Molecular Function: transferase activity (GO:0016740))
Trimeric LpxA-like enzymes (db=superfamily db_id=SSF51161 from=2 to=198 evalue=1.9e-40 interpro_id=IPR011004 interpro_description=Trimeric LpxA-like GO=Molecular Function: transferase activity (GO:0016740))
ACD12_103_47

Not on your lists

comp(32075..33481)
DNA (1407bp) protein (469aa)
VanW family protein
seg (db=Seg db_id=seg from=12 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=33)
VanW (db=HMMPfam db_id=PF04294 from=249 to=384 evalue=4.3e-43 interpro_id=IPR007391 interpro_description=VanW)
ACD12_103_48

Not on your lists

33488..34942
DNA (1455bp) protein (485aa)
family 1 extracellular solute-binding protein
seg (db=Seg db_id=seg from=54 to=76)
transmembrane_regions (db=TMHMM db_id=tmhmm from=54 to=76)
seg (db=Seg db_id=seg from=264 to=278)
ACD12_103_49

Not on your lists

34945..36984
DNA (2040bp) protein (680aa)
seg (db=Seg db_id=seg from=369 to=382)
seg (db=Seg db_id=seg from=596 to=608)
Uncharacterized protein {ECO:0000313|EMBL:EKE15188.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD12_103_50

Not on your lists

36987..37727
DNA (741bp) protein (247aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=21 to=43)
seg (db=Seg db_id=seg from=8 to=17)
Sortase (db=HMMPfam db_id=PF04203 from=115 to=243 evalue=5.1e-25 interpro_id=IPR005754 interpro_description=Peptidase C60, sortase A/B)
ACD12_103_51

Not on your lists

37778..40024
DNA (2247bp) protein (749aa)
hypothetical protein
seg (db=Seg db_id=seg from=44 to=67)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
seg (db=Seg db_id=seg from=390 to=403)
ACD12_103_52

Not on your lists

comp(40473..41789)
DNA (1317bp) protein (439aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=48 to=72 evalue=NA)
coiled-coil (db=Coil db_id=coil from=85 to=106 evalue=NA)
seg (db=Seg db_id=seg from=86 to=97)
Displaying items 31-52 of 52 in total

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