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ACD12_109

Alias: ACD12_4998.3330.6

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD12_109_1

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125..526
DNA (402bp) protein (134aa)
protein of unknown function UPF0102; K07460 putative endonuclease (db=KEGG evalue=1.0e-14 bit_score=81.6 identity=40.83 coverage=83.5820895522388)
Restriction endonuclease-like (db=superfamily db_id=SSF52980 from=16 to=124 evalue=7.7e-19 interpro_id=IPR011335 interpro_description=Restriction endonuclease, type II-like GO=Molecular Function: DNA binding (GO:0003677))
UPF0102 (db=HMMPfam db_id=PF02021 from=18 to=114 evalue=2.9e-18 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
UPF0102 (db=HAMAP db_id=MF_00048 from=11 to=127 evalue=18.42 interpro_id=IPR003509 interpro_description=Uncharacterised protein family UPF0102)
ACD12_109_2

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604..957
DNA (354bp) protein (118aa)
DNA-binding protein
coiled-coil (db=Coil db_id=coil from=57 to=88 evalue=NA)
ZF_DKSA_1 (db=PatternScan db_id=PS01102 from=92 to=116 evalue=0.0 interpro_id=IPR020458 interpro_description=Zinc finger, DksA/TraR C4-type conserved site)
zf-dskA_traR (db=HMMPfam db_id=PF01258 from=87 to=116 evalue=1.8e-08 interpro_id=IPR000962 interpro_description=Zinc finger, DksA/TraR C4-type GO=Molecular Function: zinc ion binding (GO:0008270))
ACD12_109_3

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2128..2775
DNA (648bp) protein (216aa)
seg (db=Seg db_id=seg from=73 to=90)
transmembrane_regions (db=TMHMM db_id=tmhmm from=190 to=209)
transmembrane_regions (db=TMHMM db_id=tmhmm from=166 to=185)
transmembrane_regions (db=TMHMM db_id=tmhmm from=144 to=162)
ACD12_109_4

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2789..3364
DNA (576bp) protein (192aa)
seg (db=Seg db_id=seg from=3 to=25)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
Uncharacterized protein {ECO:0000313|EMBL:EKE14228.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Displaying 4 items

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