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ACD12_248_3

Organism: ACD12

megabin RP 52 / 55 MC: 37 BSCG 46 / 51 MC: 26 ASCG 0 / 38
Location: comp(1930..2712)

Top 3 Functional Annotations

Value Algorithm Source
NtrC family signal transduction histidine kinase similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 261.0
  • Bit_score: 148
  • Evalue 2.10e-33
seg (db=Seg db_id=seg from=6 to=17) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null
seg (db=Seg db_id=seg from=153 to=167) iprscan interpro
DB: Seg
  • Identity: null
  • Coverage: null
  • Bit_score: null

Lists

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Notes

not Fe hydrogenase- no L1, L2, L3 motif kelly wrighton (11/30/12)
no L2 and L3 active motifs- L1 is TSCNNTKA- only partial. remove from Fe hydrogenase list kelly wrighton (11/30/12)

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 783
ATGACAGACGCAGACAAATTAATTAATCTACTTCAAAATAAACAAAAACTCGTCGCCATGATCGCTCCCTCTTTTCCAATCATGTATGACCATACAAAAATCGTTGGTCAATTAAAAAATCTTGGTTTTGAAAAAATAGTTGAAGTGTCGGTCGGCGCAAAAGAAACCAATAGACAGCTTGTGGAATTTATAAAGGCCAACCCAGAGAAAAGACTGATCACCAGTCCCTGTGCCAGTTTTGTCAGATTCATTAAAACTAAACACCGGGAGTTTTTACCCTATTTGGCGGTTGATGTTGATTCGCCAATGGTGGCCACCGCTAAAATCGTTAAAGAAAAATATCCGGGATTCCAACCGGTTTTTATTGGCCCCTGCATCGTCAAAAAACTTGAAGCTTCCCAAGACCACCCGGAACTAAATATTTTAGTTCTAACGTACAAAGAGATTGATTCGATTCTTACTCAATTGCTTCCTACAACCTACCAACTACAACCCACAACCTCTTTTGATATTTCCGAATCTTCAACTCGCATGTACCCGACTGACGGAGGATTAACAGATTCAAGTGGTGTCAGAAATCTAATTGGTGACGACGCGATCAGGATTGTTTCTGGCTATAAAAATTGTGGGGCAGCCCTAACGGAATTCCAAAATAACCCCAAGATAAAACTTCTTGATATTCTTTTCTGTGAGGGTGGTTGTATCAACGGACCAGGAATTGCTAGTTCTTTATCGATTGAAGAAAGAAAGAAAAAAATCCTTGAATATTCTCATAAGTCTTAA
PROTEIN sequence
Length: 261
MTDADKLINLLQNKQKLVAMIAPSFPIMYDHTKIVGQLKNLGFEKIVEVSVGAKETNRQLVEFIKANPEKRLITSPCASFVRFIKTKHREFLPYLAVDVDSPMVATAKIVKEKYPGFQPVFIGPCIVKKLEASQDHPELNILVLTYKEIDSILTQLLPTTYQLQPTTSFDISESSTRMYPTDGGLTDSSGVRNLIGDDAIRIVSGYKNCGAALTEFQNNPKIKLLDILFCEGGCINGPGIASSLSIEERKKKILEYSHKS*