ggKbase home page

ACD12_345_2

Organism: ACD12

megabin RP 52 / 55 MC: 37 BSCG 46 / 51 MC: 26 ASCG 0 / 38
Location: 265..813

Top 3 Functional Annotations

Value Algorithm Source
rplF; ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 180.0
  • Bit_score: 189
  • Evalue 9.90e-46
RIBOSOMAL_L6_1 (db=PatternScan db_id=PS00525 from=155 to=163 evalue=0.0 interpro_id=IPR002358 interpro_description=Ribosomal protein L6, conserved site GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
L6_bact: ribosomal protein L6 (db=HMMTigr db_id=TIGR03654 from=2 to=177 evalue=8.3e-88 interpro_id=IPR019906 interpro_description=Ribosomal protein L6, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.30e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 549
ATGTCAAAAATTGGTAAAAAAATAATAATTGTTCCTGAAGATGTTAATGTCGTTTATGATGACAAACTTAATAATCTGAAAATTTCAGGACCAAAGGGTGAGTTGGAAGTTAAAATGAAATCCAGAATTCTATTTGATATGAAAGAAAATATCATCAAGATCAATAGAAAAAATGAACAGAAAAGTACAAAATCTCTACACGGTTTATATCGTTCATTGATAGCCAATGCTATTGTCGGCGTAACTCGAGGATACGAAAAGAATTTAGAAGTTATTGGAATTGGCTACCGTGTAACACTAGAAAATAATAAATTGATCTTAAGTGTTGGTTTTTCTCATAATGTTGAAATAATTGCTTCAGAAGGAATTGATATAAAAGTTGAAAAAAATAGTATTAAAATATCTGGAATTGATAAACAATTAGTTGGTAATTTTGCAGCTAATATTCGAAAAGTACGACCGCCCGAACCATATAAGGGGAAAGGTATCCGTTACTCGGATGAAGTTGTAAAATTAAAACCTGGTAAATCACTAAAGGCAGAAAAATAA
PROTEIN sequence
Length: 183
MSKIGKKIIIVPEDVNVVYDDKLNNLKISGPKGELEVKMKSRILFDMKENIIKINRKNEQKSTKSLHGLYRSLIANAIVGVTRGYEKNLEVIGIGYRVTLENNKLILSVGFSHNVEIIASEGIDIKVEKNSIKISGIDKQLVGNFAANIRKVRPPEPYKGKGIRYSDEVVKLKPGKSLKAEK*