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ACD37_63

Alias: ACD37_169590.6412.8

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD37_63_1

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246..1298
DNA (1053bp) protein (351aa)
hypothetical protein
hypothetical protein
Elongation factor Tu n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 RepID=C8WTX5_ALIAD (db=UNIREF evalue=1.0e-134 bit_score=483.0 identity=74.63 coverage=94.8717948717949)
seg (db=Seg db_id=seg from=94 to=114)
ACD37_63_2

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1338..1646
DNA (309bp) protein (103aa)
rpsJ; 30S ribosomal protein S10
RIBOSOMAL_S10 (db=PatternScan db_id=PS00361 from=29 to=44 evalue=0.0 interpro_id=IPR018268 interpro_description=Ribosomal protein S10, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsJ_bact: ribosomal protein S10 (db=HMMTigr db_id=TIGR01049 from=4 to=102 evalue=8.0e-57 interpro_id=IPR005731 interpro_description=Ribosomal protein S10 subgroup GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER (db=HMMPanther db_id=PTHR11700 from=1 to=102 evalue=4.7e-48 interpro_id=IPR001848 interpro_description=Ribosomal protein S10 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD37_63_3

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comp(1649..2149)
DNA (501bp) protein (167aa)
seg (db=Seg db_id=seg from=58 to=75)
Uncharacterized protein {ECO:0000313|EMBL:EKD86870.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_63_4

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2198..2608
DNA (411bp) protein (137aa)
seg (db=Seg db_id=seg from=15 to=33)
AraC_E_bind (db=HMMPfam db_id=PF06445 from=33 to=127 evalue=3.9e-06 interpro_id=IPR010499 interpro_description=Bacterial transcription activator, effector binding)
Uncharacterized protein {ECO:0000313|EMBL:EKD86871.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_63_5

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2738..3400
DNA (663bp) protein (221aa)
2738..3400 + (rbs_motif=TAATA rbs_spacer=14bp)
Uncharacterized protein {ECO:0000313|EMBL:EKD86872.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_63_6

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3501..4940
DNA (1440bp) protein (480aa)
seg (db=Seg db_id=seg from=415 to=427)
seg (db=Seg db_id=seg from=366 to=376)
seg (db=Seg db_id=seg from=30 to=53)
transmembrane_regions (db=TMHMM db_id=tmhmm from=27 to=49)
ACD37_63_7

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5222..6025
DNA (804bp) protein (268aa)
rplC; 50S ribosomal protein L3
seg (db=Seg db_id=seg from=225 to=248)
RIBOSOMAL_L3 (db=PatternScan db_id=PS00474 from=102 to=125 evalue=0.0 interpro_id=IPR019926 interpro_description=Ribosomal protein L3, conserved site)
L3_bact: 50S ribosomal protein L3 (db=HMMTigr db_id=TIGR03625 from=3 to=203 evalue=1.5e-87 interpro_id=IPR019927 interpro_description=Ribosomal protein L3, bacterial/organelle-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD37_63_8

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5997..6137
DNA (141bp) protein (47aa)
seg (db=Seg db_id=seg from=21 to=42)
Uncharacterized protein {ECO:0000313|EMBL:EKD86875.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD37_63_9

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6124..6444
DNA (321bp) protein (107aa)
rplD; 50S ribosomal protein L4
seg (db=Seg db_id=seg from=20 to=40)
seg (db=Seg db_id=seg from=4 to=15)
Ribosomal protein L4 (db=superfamily db_id=SSF52166 from=43 to=107 evalue=1.3e-12 interpro_id=IPR002136 interpro_description=Ribosomal protein L4/L1e GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying 9 items

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