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ACD38_14

Alias: ACD38_62561.38701.11

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Displaying items 31-43 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD38_14_31
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

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27428..27637
DNA (210bp) protein (70aa)
seg (db=Seg db_id=seg from=38 to=57)
Uncharacterized protein {ECO:0000313|EMBL:KKR15756.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_14_32
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

27591..27914
DNA (324bp) protein (108aa)
27591..27914 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKR15755.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_14_33
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

27952..28272
DNA (321bp) protein (107aa)
dnaG; DNA primase (EC:2.7.7.-)
Zinc beta-ribbon (db=superfamily db_id=SSF57783 from=20 to=106 evalue=1.9e-17)
zf-CHC2 (db=HMMPfam db_id=PF01807 from=48 to=103 evalue=1.3e-16 interpro_id=IPR002694 interpro_description=Zinc finger, CHC2-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication (GO:0006260), Molecular Function: zinc ion binding (GO:0008270))
no description (db=HMMSmart db_id=SM00400 from=51 to=104 evalue=1.1e-12 interpro_id=IPR002694 interpro_description=Zinc finger, CHC2-type GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA primase activity (GO:0003896), Biological Process: DNA replication (GO:0006260), Molecular Function: zinc ion binding (GO:0008270))
ACD38_14_34
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

28269..29906
DNA (1638bp) protein (546aa)
seg (db=Seg db_id=seg from=86 to=97)
seg (db=Seg db_id=seg from=429 to=443)
DNA primase core (db=superfamily db_id=SSF56731 from=76 to=190 evalue=2.4e-09)
no description (db=Gene3D db_id=G3DSA:3.40.1360.10 from=59 to=189 evalue=2.7e-07)
ACD38_14_35
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

30193..30546
DNA (354bp) protein (118aa)
30193..30546 + (rbs_motif=None rbs_spacer=None)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OP11_Curtissbacteria_40_16_curated
ACD38_14_36
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

30530..30919
DNA (390bp) protein (130aa)
30530..30919 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:KKR15751.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_14_37
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

30916..32442
DNA (1527bp) protein (509aa)
coiled-coil (db=Coil db_id=coil from=180 to=201 evalue=NA)
coiled-coil (db=Coil db_id=coil from=246 to=267 evalue=NA)
seg (db=Seg db_id=seg from=455 to=466)
Uncharacterized protein {ECO:0000313|EMBL:KKR15750.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_14_38
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

32457..32645
DNA (189bp) protein (63aa)
excise: DNA binding domain, excisionase fami (db=HMMTigr db_id=TIGR01764 from=4 to=53 evalue=7.3e-12 interpro_id=IPR010093 interpro_description=Excisionase/Xis, DNA-binding GO=Molecular Function: DNA binding (GO:0003677))
Putative DNA-binding domain (db=superfamily db_id=SSF46955 from=3 to=54 evalue=2.6e-06 interpro_id=IPR009061 interpro_description=Putative DNA binding domain GO=Molecular Function: nucleotide binding (GO:0000166))
Excisionase/Xis, DNA-binding protein {ECO:0000313|EMBL:KKR15749.1}; TaxID=1618423 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA2_39_33.;"
ACD38_14_39
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

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32645..32998
DNA (354bp) protein (118aa)
DNA invertase n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BN32_9GAMM (db=UNIREF evalue=3.0e-18 bit_score=94.0 identity=40.34 coverage=97.4576271186441)
site-specific recombinase, DNA invertase Pin
coiled-coil (db=Coil db_id=coil from=2 to=23 evalue=NA)
RECOMBINASES_1 (db=PatternScan db_id=PS00397 from=6 to=14 evalue=0.0 interpro_id=IPR006118 interpro_description=Recombinase, conserved site GO=Molecular Function: recombinase activity (GO:0000150), Biological Process: DNA recombination (GO:0006310))
ACD38_14_40
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

33191..34264
DNA (1074bp) protein (358aa)
Site-specific recombinase, DNA invertase Pin
Putative site-specific recombinase n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTN0_9BACT (db=UNIREF evalue=1.0e-18 bit_score=97.8 identity=24.33 coverage=90.7821229050279)
seg (db=Seg db_id=seg from=222 to=230)
seg (db=Seg db_id=seg from=193 to=208)
ACD38_14_41
R_OP11_Curtissbacteria_40_16, Curtissbacteria, Microgenomates, Bacteria

Not on your lists

34284..35330
DNA (1047bp) protein (349aa)
GTP-binding protein YchF
GTP-binding protein YchF
GTP-binding protein YchF n=3 Tax=Clostridium thermocellum RepID=A3DDT2_CLOTH (db=UNIREF evalue=1.0e-91 bit_score=340.0 identity=53.87 coverage=95.9885386819484)
GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR23305 from=1 to=348 evalue=7.9e-146)
ACD38_14_42
GWF2_OP11_38_7, Daviesbacteria, Microgenomates, Bacteria

Not on your lists


37596..37919
DNA (324bp) protein (108aa)
30S ribosomal protein S6
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=17 to=107 evalue=8.4e-23 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=15 to=106 evalue=1.5e-20 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
no description (db=Gene3D db_id=G3DSA:3.30.70.60 from=14 to=106 evalue=3.0e-20 interpro_id=IPR014717 interpro_description=Translation elongation factor EF1B/ribosomal protein S6)
ACD38_14_43
GWA2_OP11_ACD38-rel_39_33, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

38010..38516
DNA (507bp) protein (169aa)
hypothetical protein
seg (db=Seg db_id=seg from=126 to=153)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=4 to=127 evalue=4.0e-45 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ssb: single-strand binding protein (db=HMMTigr db_id=TIGR00621 from=4 to=168 evalue=4.6e-45 interpro_id=IPR011344 interpro_description=Single-strand DNA-binding GO=Molecular Function: single-stranded DNA binding (GO:0003697), Biological Process: DNA replication (GO:0006260))
Displaying items 31-43 of 43 in total

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