ggKbase home page

ACD38_7_24

Organism: ACD38

near complete RP 48 / 55 MC: 11 BSCG 45 / 51 MC: 4 ASCG 0 / 38
Location: comp(19425..19670)

Top 3 Functional Annotations

Value Algorithm Source
RRM domain RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 79.0
  • Bit_score: 103
  • Evalue 3.20e-20
RNP-1 like RNA-binding protein n=1 Tax=Delftia acidovorans SPH-1 RepID=A9C016_DELAS (db=UNIREF evalue=1.0e-20 bit_score=102.0 identity=58.75 coverage=96.3414634146341) similarity UNIREF
DB: UNIREF
  • Identity: 58.75
  • Coverage: 96.34
  • Bit_score: 102
  • Evalue 1.00e-20
GLYCINE-RICH RNA-BINDING PROTEIN (db=HMMPanther db_id=PTHR10432:SF31 from=1 to=81 evalue=8.2e-32 interpro_id=IPR015465 interpro_description=RNA recognition motif, glycine rich protein) iprscan interpro
DB: HMMPanther
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.20e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC1_OD1_36_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 246
TTGTTCGTAGGTTCTTTACCTTGGGCTGTTGATGATGCCAAGCTTGGTGAGATTTTTGCTCAGGCTGGTAATGTTGTCTCAGCACAGGTTGTTAAAGACCGTGAGACAGGCAGATCCAGAGGATTTGGTTTCGTCGAGATGTCTACTGATGAAGAAGCTCAAAACGCAGTCAAAAATCTTAATGGTGCAGATGTTGAAGGTCGCAAGATCGTTGTTAACATTGCTCGTCCCAGAGAAGATCGTTAA
PROTEIN sequence
Length: 82
LFVGSLPWAVDDAKLGEIFAQAGNVVSAQVVKDRETGRSRGFGFVEMSTDEEAQNAVKNLNGADVEGRKIVVNIARPREDR*