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gwc1_scaffold_390_15

Organism: GWC1_OD1-rel_43_10

partial RP 36 / 55 BSCG 39 / 51 ASCG 9 / 38 MC: 1
Location: 15671..16243

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-subfamily sigma factor n=3 Tax=Streptomyces RepID=D6KA62_9ACTO alias=ACD81_C00021G00004,ACD81_201.6321.54G0004,ACD81_201.6321.54_4 id=133419 tax=ACD81 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=OD1, not OD1-i organism_desc=OD1 similarity UNIREF
DB: UNIREF90
  • Identity: 47.2
  • Coverage: null
  • Bit_score: 179
  • Evalue 7.00e-43
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:KKT23062.1}; TaxID=1618875 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWB1_43_8b.;" UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 370
  • Evalue 1.60e-99
adsA; RNA polymerase, sigma-24 subunit, ECF subfamily KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 187.0
  • Bit_score: 131
  • Evalue 3.30e-28

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Taxonomy

Parcubacteria bacterium GW2011_GWB1_43_8b → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGAAAGATGGACGCGAAAAAATAGAAGAAGAAAAGCTGGTGAAGCGCGCCATTAGGGGTGAGTCCTCGGCTTTTGGCCTGCTTTACGATAGATACCAACCGGCTATCTTTCGGTTTATCTATCTTAAGGTAGGCCACCGTGAGGAAGCCGAGGATCTCACCCACCAGACATTCCTTTCGGCCTGGCAGAATATCGAAAGTTTCAGGCGAGAAGGTTTTTCTATTTCCAGCTGGTTTTATCGAATCGCCCGCAATAAGGTGATTGACTACTACCGGACAAAAAAATCAACGCTGGAGCTGAATCGAATTCTTGAAGAAACACTGACAAGCGATTCCACCCAGCAGGCAGAAAGTTTATCTCAGAAAATGGAATTGGGACTTGTCCGAAAGGCAATTCAGAGCCTTTCCACCGAACAGCAAGATGTTTTAATCATGAGATTTGTCGAAGAAATGTCCTATCGAGAAATTTCTCAAGTGATGGAAAAGAATCAGGGGTTAATTAGAGTCATTCAATTCCGAGCTTTAAGAAAGATAAAAAAAATTATAGAAAATGGAGCCAAAGACAATTATTAA
PROTEIN sequence
Length: 191
MKDGREKIEEEKLVKRAIRGESSAFGLLYDRYQPAIFRFIYLKVGHREEAEDLTHQTFLSAWQNIESFRREGFSISSWFYRIARNKVIDYYRTKKSTLELNRILEETLTSDSTQQAESLSQKMELGLVRKAIQSLSTEQQDVLIMRFVEEMSYREISQVMEKNQGLIRVIQFRALRKIKKIIENGAKDNY*