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QH_2_Parcubacteria_50_6

In projects: QH_2  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Parcubacteria  →  Bacteria

Taxonomy override: Parcubacteria

Displaying items 1-50 of 235 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
qh_2_scaffold_1317
Phylum: Parcubacteria (60%)
5 5873 bp 53.29 5.67 87.35
qh_2_scaffold_6766
Phylum: Parcubacteria (50%)
6 5425 bp 48.37 6.75 55.65
qh_2_scaffold_2011
Phylum: Parcubacteria (50%)
4 4722 bp 53.09 6.25 83.74
qh_2_scaffold_14359
Phylum: Parcubacteria (50%)
12 4493 bp 50.61 6.14 84.82
qh_2_scaffold_3518
Phylum: Parcubacteria (75%)
4 4074 bp 44.82 5.94 86.97
qh_2_scaffold_6444
Phylum: Parcubacteria (66.67%)
6 4017 bp 52.05 6.70 84.24
qh_2_scaffold_7777
Phylum: Parcubacteria (66.67%)
3 3880 bp 42.55 7.32 77.94
qh_2_scaffold_22415
Phylum: Parcubacteria (71.43%)
7 3825 bp 52.99 6.27 85.88
qh_2_scaffold_22257
Phylum: Parcubacteria (100%)
7 3563 bp 53.66 5.59 84.70
qh_2_scaffold_11608
Phylum: Parcubacteria (66.67%)
6 3488 bp 46.33 5.30 83.17
qh_2_scaffold_11355
Class: Magasanikbacteria (50%)
4 3405 bp 52.78 6.20 76.92
qh_2_scaffold_3987
Phylum: Parcubacteria (66.67%)
3 3238 bp 44.22 6.21 96.26
qh_2_scaffold_4274
Species: RIFOXYD1_FULL_OD1_46_19_curated (50%)
4 3116 bp 52.86 7.77 78.37
qh_2_scaffold_18640
Phylum: Parcubacteria (80%)
5 3102 bp 48.81 5.22 81.91
qh_2_scaffold_9674
Class: RIF-OD1-11 (50%)
4 3088 bp 46.50 7.77 91.32
qh_2_scaffold_26031
Phylum: Parcubacteria (80%)
5 3018 bp 43.70 6.33 85.79
qh_2_scaffold_7947
Phylum: Parcubacteria (80%)
5 3006 bp 41.75 7.78 74.65
qh_2_scaffold_10230
Phylum: Parcubacteria (66.67%)
3 2962 bp 46.56 5.50 75.05
qh_2_scaffold_4726
Phylum: Parcubacteria (75%)
4 2943 bp 53.62 5.30 85.83
qh_2_scaffold_4768
Phylum: Parcubacteria (75%)
4 2928 bp 51.81 5.57 83.30
qh_2_scaffold_4770
Phylum: Parcubacteria (50%)
4 2926 bp 50.41 5.71 94.53
qh_2_scaffold_5328
Species: R_OD1_45_15 (50%)
2 2731 bp 49.87 6.99 74.04
qh_2_scaffold_13224
Phylum: Parcubacteria (66.67%)
3 2721 bp 50.75 6.28 88.86
qh_2_scaffold_11042
Phylum: Parcubacteria (66.67%)
3 2672 bp 49.93 6.36 64.67
qh_2_scaffold_10152
Phylum: Parcubacteria (75%)
4 2590 bp 51.43 6.14 80.97
qh_2_scaffold_20621
Phylum: Parcubacteria (66.67%)
3 2549 bp 50.45 5.73 79.91
qh_2_scaffold_14588
Phylum: Parcubacteria (60%)
5 2541 bp 49.63 5.67 57.97
qh_2_scaffold_6104
Phylum: Parcubacteria (66.67%)
3 2522 bp 50.48 7.77 70.90
qh_2_scaffold_6217
Phylum: Parcubacteria (66.67%)
6 2497 bp 42.81 6.17 87.71
qh_2_scaffold_20646
Phylum: Parcubacteria (100%)
3 2460 bp 50.00 4.59 61.83
qh_2_scaffold_9877
Phylum: Parcubacteria (80%)
5 2457 bp 50.79 5.09 81.44
qh_2_scaffold_6417
Phylum: Parcubacteria (60%)
5 2452 bp 49.88 7.26 77.57
qh_2_scaffold_6600
Species: R_RIF_OD1_10_39_10 (50%)
2 2412 bp 51.70 5.39 80.97
qh_2_scaffold_6605
Phylum: Parcubacteria (100%)
3 2411 bp 52.18 5.10 94.82
qh_2_scaffold_6692
Species: CG_Nomura_04 (66.67%)
3 2392 bp 53.60 5.35 96.57
qh_2_scaffold_6795
Species: GWD2_OD1_42_14 (100%)
1 2368 bp 56.80 5.07 88.30
qh_2_scaffold_24735
Phylum: Parcubacteria (80%)
5 2350 bp 52.94 5.02 89.36
qh_2_scaffold_12915
Phylum: Parcubacteria (60%)
5 2339 bp 49.64 4.40 72.98
qh_2_scaffold_6953
Species: R_OD1_46_25 (100%)
2 2336 bp 52.70 7.79 75.00
qh_2_scaffold_10017
Phylum: Parcubacteria (66.67%)
3 2329 bp 51.65 6.53 94.29
qh_2_scaffold_7134
Phylum: Parcubacteria (75%)
4 2297 bp 51.50 6.23 96.26
qh_2_scaffold_15417
Phylum: Parcubacteria (100%)
3 2274 bp 50.40 6.73 55.94
qh_2_scaffold_30016
Phylum: Parcubacteria (100%)
4 2261 bp 49.98 7.47 92.08
qh_2_scaffold_7342
Species: R_RIF_OD1_07_45_25 (50%)
2 2253 bp 41.77 7.32 77.36
qh_2_scaffold_13017
Species: Parcubacteria bacterium RAAC4_OD1_1 (50%)
2 2248 bp 38.88 6.01 55.52
qh_2_scaffold_13871
Phylum: Parcubacteria (66.67%)
3 2243 bp 53.10 6.33 70.49
qh_2_scaffold_18696
Phylum: Parcubacteria (66.67%)
3 2230 bp 52.87 5.87 90.81
qh_2_scaffold_11662
Species: CG_Nomura_04 (50%)
2 2216 bp 50.32 7.76 68.50
qh_2_scaffold_14866
Phylum: Parcubacteria (100%)
3 2211 bp 48.08 5.92 46.95
qh_2_scaffold_7704
Phylum: Parcubacteria (66.67%)
3 2188 bp 47.58 6.67 93.10
Displaying items 1-50 of 235 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.