ggKbase home page

qh_3_scaffold_5065_5

Organism: QH_3_TM7_54_7

partial RP 19 / 55 BSCG 24 / 51 MC: 2 ASCG 1 / 38
Location: comp(2166..2495)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L18 similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 104.0
  • Bit_score: 106
  • Evalue 5.10e-21
50S ribosomal protein L18 id=2440950 bin=GWC2_TM7_44_17 species=candidate division TM7 single-cell isolate TM7c genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWC2_TM7_44_17 organism_group=TM7 organism_desc=Genome has competed version similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 110.0
  • Bit_score: 106
  • Evalue 1.40e-20
rplR; ribosomal protein L18 Tax=RIFCSPHIGHO2_01_FULL_Saccharibacteria_45_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.5
  • Coverage: 109.0
  • Bit_score: 106
  • Evalue 1.90e-20

Lists

This feature is not on any list.

Notes

TM7 Jill Banfield (10/23/14)

Taxonomy

R_Saccharibacteria_45_15 → Candidatus Saccharibacteria → Bacteria

Sequences

DNA sequence
Length: 330
ATGAGCGTCACCAGCAGGCTGGCCAGAACCAAACAGCAGATCCGCGGTGACGGGAATCGCCCACGTTTGAGCGTGACGATTTCCAACGCGCACGTCTACGCCCAGATTATAGACGATACGATAGGCCATACGCTGGTCTTCAGCTCTTCCTCCGCTGCCGGGGTAACTGGTAGCATGAGGGAAAAAGCCCAGTGGGTGGGCAGTGACATTGCCCAAAAAGCCCGGGAAGCGGATATTGTCCGGGTGATATTTGATCGCCGAAGCAGAAAGTTCCACGGGCGGGTGGCGGCATTCGCCCAAGCTGCCCGTGAACACGGATTGGAGTTTTAG
PROTEIN sequence
Length: 110
MSVTSRLARTKQQIRGDGNRPRLSVTISNAHVYAQIIDDTIGHTLVFSSSSAAGVTGSMREKAQWVGSDIAQKAREADIVRVIFDRRSRKFHGRVAAFAQAAREHGLEF*