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ACD3_98_1

Organism: ACD3

near complete RP 47 / 55 MC: 12 BSCG 46 / 51 MC: 3 ASCG 0 / 38
Location: comp(3..434)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase D similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 148.0
  • Bit_score: 166
  • Evalue 5.30e-39
LigD_PE_dom: DNA ligase D, 3'-phosphoeste (db=HMMTigr db_id=TIGR02777 from=2 to=143 evalue=8.0e-45 interpro_id=IPR014144 interpro_description=DNA ligase D, 3'-phosphoesterase domain) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 8.41e-45
ATP dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1] alias=ACD3_565.2373.87_1,ACD3_565.2373.87G0001,ACD3_C00098G00001 id=51117 tax=ACD3 species=Pedobacter sp. BAL39 genus=Pedobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes organism_group=BD1-5 organism_desc=BD1-5 similarity UNIREF
DB: UNIREF90
  • Identity: 100.0
  • Coverage: null
  • Bit_score: 323
  • Evalue 3.90e-86

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Taxonomy

ACD3 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 432
ATGTTAGAAACTTATAAGGAAAAAAGAGATTTTTCAAAAACTCGAGAACCTTCTTGAGAAAAAATGAAAGAAGGAAAGAATCTTTTATTCGTCATACATAAGCATGCTGCGACTCGGCTTCATTATGACTTAAGGCTTGAGCTGGAATGAGTGCTGAAAAGTTGGGCTGTTCCAAAATGACCAAGCTATAACCCGGATGAGAAGAGGTTGGCGGTCATGGTTGAAGACCATCCTTATGATTATAAGGATTTTGAATGAACAATACCAAAAGATGAATATGGATGATGAACTGTAATGATATGGGATTATTGAACATATCAGCCTATTTATTCAACATGAGATAAGGGAAAAGATGAAAAAGCTGCAATGGAAATGCTGGAAAAGTGAAGACTCAGCTTTATTCTAAATTGAAAAAAACTTAAATGAGAATTC
PROTEIN sequence
Length: 144
MLETYKEKRDFSKTREPSGEKMKEGKNLLFVIHKHAATRLHYDLRLELEGVLKSWAVPKGPSYNPDEKRLAVMVEDHPYDYKDFEGTIPKDEYGGGTVMIWDYGTYQPIYSTGDKGKDEKAAMEMLEKGRLSFILNGKKLKGEF