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sw_4_scaffold_16610_2

Organism: SW_4_Parcubacteria_46_8

partial RP 33 / 55 MC: 1 BSCG 35 / 51 MC: 4 ASCG 7 / 38 MC: 2
Location: 277..879

Top 3 Functional Annotations

Value Algorithm Source
ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein Tax=RIFOXYC1_FULL_RIF_OD1_09_52_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 45.1
  • Coverage: 195.0
  • Bit_score: 180
  • Evalue 1.90e-42
engB, yihA, ysxC; ribosome biogenesis GTP-binding protein YsxC; K03978 GTP-binding protein id=17164 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i similarity UNIREF
DB: UNIREF100
  • Identity: 44.4
  • Coverage: 189.0
  • Bit_score: 166
  • Evalue 2.10e-38
GTP-binding protein engB similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 194.0
  • Bit_score: 134
  • Evalue 3.20e-29

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Taxonomy

RIFOXYC1_FULL_RIF_OD1_09_52_10_curated → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGACAAGTACTTACAAATCAGCAGAATATATCCGCTCTATAACCGGAGAGGATACGATACTTCAGGATCCACGCGAGCAGATCGCGTTTGTCGGACGCTCGAATACAGGAAAATCGAGTGTGATAAACTGCCTTGCCGGCCGCTCGAATTTAGCCCAATCAAGTAACACACCCGGGAAAACTCGTAGTATTGATTTGTATCTTATCAACGACTCATTTTATCTTGTTGATCTGCCCGGCTTTGGATATACCAAAACTAAAGCACGTCATGCACAAAAACTCAGAGAGATGATTATCTGGTATCTGGCCGGGCAACCTAACCGCCCGCAGCTTGTCGTACATGTTATCGATGCAAAGGCGGGCATCACACGAAAAGACGAAGAAATGCTTGATATACTAGCAGGCGAGCAGTATTCGATTGTGGTGCTTGCAAATAAGATAGATAAATTGAATCAGTCACAGGCATCGTCTGCACTCTCTCAGATAGAAACACAGATACAGGACTGGCAACACACGAAGGCAACTATTGTACCGTTTTCGGCACGAACCGGACAGGGGAGACAGGAGGGGTTGAGTAAATTTGATGAAGCAGTATCAGAATGA
PROTEIN sequence
Length: 201
MTSTYKSAEYIRSITGEDTILQDPREQIAFVGRSNTGKSSVINCLAGRSNLAQSSNTPGKTRSIDLYLINDSFYLVDLPGFGYTKTKARHAQKLREMIIWYLAGQPNRPQLVVHVIDAKAGITRKDEEMLDILAGEQYSIVVLANKIDKLNQSQASSALSQIETQIQDWQHTKATIVPFSARTGQGRQEGLSKFDEAVSE*