ggKbase home page

RifSed_csp2_19ft_3_scaffold_5369_4

Organism: RifSed_csp2_19ft_3_Abawaca2_18

near complete RP 39 / 55 MC: 2 BSCG 44 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(2133..2654)

Top 3 Functional Annotations

Value Algorithm Source
nuclear protein SET id=75409 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 150.0
  • Bit_score: 321
  • Evalue 3.30e-85
  • rbh
nuclear protein SET similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 166.0
  • Bit_score: 105
  • Evalue 1.40e-20
Tax=RBG_16_RIF_OP11_02_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 167.0
  • Bit_score: 353
  • Evalue 1.40e-94

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 522
ATGTATTATAATATAAATATGCTTAATCCTGACGTAACGGTTAGCAAAAGTGAATTAGAGGGAATCGGTTTAATTGCGGCTCGTGACATTCCGGTGGGAGCTGTTATTTGGAAAATGGAGCCGGATACAATTCAGTTGACCCCCGACAAGATATCAACAGTACGGAGCGAGTATCACAAGTTCATCCATCACTACAAAGACAGGTTTATTTTTGTCCAGGATGACAGGATGTACATCAACCACAGCTGCGACCCCAACACTTGGTGGGCAGATGACGAAACCTTAATTGCAAAACGCAATATCAAAGCGGATGAAGAAGTTACTTATGATTATGCGACTACCGAAATTACGGAAGAAACAATGCACAAGTTTGCCTGCAATTGCGGGGCAGCGAATTGTCGCGGTTCAGTTACCCCAGGCGACTTTAAAGATCCCGACTTCCAAAAAGAACACGAAGGCCACTTGCCCAGCTGGACGGTTGCCGCTATTGCGGCAAGTAAAACCGGAAATATACTAAGTTAA
PROTEIN sequence
Length: 174
MYYNINMLNPDVTVSKSELEGIGLIAARDIPVGAVIWKMEPDTIQLTPDKISTVRSEYHKFIHHYKDRFIFVQDDRMYINHSCDPNTWWADDETLIAKRNIKADEEVTYDYATTEITEETMHKFACNCGAANCRGSVTPGDFKDPDFQKEHEGHLPSWTVAAIAASKTGNILS*