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RifSed_csp2_19ft_3_scaffold_12405_13

Organism: RifSed_csp2_19ft_3_Abawaca2_18

near complete RP 39 / 55 MC: 2 BSCG 44 / 51 MC: 5 ASCG 10 / 38 MC: 1
Location: comp(9140..9466)

Top 3 Functional Annotations

Value Algorithm Source
rsd:TGRD_315 transketolase ; K00615 transketolase [EC:2.2.1.1] id=71991 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 86.0
  • Bit_score: 113
  • Evalue 1.10e-22
1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7) similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 70.0
  • Bit_score: 99
  • Evalue 6.10e-19
Tax=RBG_16_RIF_OP11_02_41_13_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 108.0
  • Bit_score: 217
  • Evalue 7.70e-54

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Taxonomy

RBG_16_RIF_OP11_02_41_13_curated → RIF-OP11-2 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 327
ATGATTACTAAGGAAGCGAAATTATCTAATAAAGTTTTTCAAAAAGAAGTCGAGAGTGTTCCTACCCGTAATGGCTATGGAGAGGCACTGGTTGAGTTAGGGGAGAGTAACCCTGATGTAGTTGTCTTGGCTGCTGATTTGGCTGAAAGTACTCGCGCTTTGGACTTTGCCAAAAAGTTCCCTGATAGGTTTATTGAATGCGGAGTTGCCGAGCAAAACATGATGGGGATTGCAGCCGGGCTTGCTGGGGCCGGGAAAAATAATCTCTATAATATCACGGCAAACCACCGAATGAAGAACAGGCCAGGGATGCTTTGCACCAATTAA
PROTEIN sequence
Length: 109
MITKEAKLSNKVFQKEVESVPTRNGYGEALVELGESNPDVVVLAADLAESTRALDFAKKFPDRFIECGVAEQNMMGIAAGLAGAGKNNLYNITANHRMKNRPGMLCTN*