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RifSed_csp2_16ft_2_scaffold_6167_3

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(2557..3042)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=15191870 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates) similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 166.0
  • Bit_score: 229
  • Evalue 2.10e-57
rpsL; 30S ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 65.8
  • Coverage: 146.0
  • Bit_score: 194
  • Evalue 1.60e-47
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 161.0
  • Bit_score: 317
  • Evalue 6.20e-84

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Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 486
ATGCCGACCATCAATCAACTCGTTCGCAAAGGTCGAAAAAAGCTTAAGAAAAAGATCAAAGCTACCGCCATGCGCCGATCATATAATGCCCGCGAGCGCAAGATGGTGGAGACCATAAATCCACAGAAGCGGGGCGTCTGTGTGGTGGTAAAAACCATGACGCCCAAAAAGCCGAACTCGGCGCTGAGAAAAGTTGCTCGGGTCAGATTAAGCAATAAACAGGAAATCACCGCCTATATTTCAGGCGAAGGCCACGAACTCGCAGAGCACTCCATCGTTCTGGTTCGCGGGGGAAGGGTCAAAGATCTTCCCGGTGTCAAATATCATGTAATCAGGGGAGTCTACGATTCCACGGGAGTTGAAAATCGCAAAAAAGGTCGCAGTAAATACGGAACCCGCAGTGGCGGAAAAGTCAGTCTACCGGGATCCGAGAAGCCGAAAGCGGCTGCGCCGGAAAGCAAAGAAACGCCAAGTAAAGTAGCCTAA
PROTEIN sequence
Length: 162
MPTINQLVRKGRKKLKKKIKATAMRRSYNARERKMVETINPQKRGVCVVVKTMTPKKPNSALRKVARVRLSNKQEITAYISGEGHELAEHSIVLVRGGRVKDLPGVKYHVIRGVYDSTGVENRKKGRSKYGTRSGGKVSLPGSEKPKAAAPESKETPSKVA*