ggKbase home page

RifSed_csp2_16ft_2_scaffold_60488_2

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: comp(391..1719)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions 25..47 id=74997 bin=ACD52 species=ACD52 genus=ACD52 taxon_order=ACD52 taxon_class=ACD52 phylum=OP11 tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 438.0
  • Bit_score: 441
  • Evalue 5.60e-121
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 442.0
  • Bit_score: 888
  • Evalue 2.40e-255

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1329
ATGACAAAACTACAAAAGAAAGTTGCCACAGCCATTGCTACCGGAGCCTTGCTGTTTAATACAGCGCTTCCGGCATTTGCAGATGTGACGCTCGAAATCTCTGGAAACGGTGCTGATACGTATAACAAGGCGGAAGTCGATGTTAATCAGAACAGAACCGTTGTACAGAGCAACGAAGCCAACATCAGCAACAACGTCACCGCAACAGCAGACACCGGAGATAACGACGCCAACCGCAATACCGGCGGAAGCGTATCGGTTGATACCGGTAATGCAACAACCAAAGTTGACGTGAGCAATGCGGCAAATAGCAACGAGGCAGAGCTGGAGTGCTGCGAAGCAGATGTCGATGTTCTGATTTCCGGAAACGGAGACAACTCCACCAACAAAGTGGAGCTTGACATCAATGACCCAAGACATCACAGAGGTCATGATGACGAATTCCTCGGAACTGGTATCTTCCAGGAGAACGAGGCGAAGATCGACAATGATGTCACAGCCAAAGCAGACACCGGAGATAACGACGCCAACCGCAATACAGGCGGAGACGTTTCTGTCACAACTGGTGATGCGAAGACAACTGTCGACATCTTAAATCAAGCGAATGCCAATTCCGCCAAAATCAGCGGAGACGGTGAAGGTGGGTCATTAAGCGCCCGCATCCTTGGCAACGGAGCTGATTCTTACAACAAGATCGAACTTGATTACAATAAGTCGGTCGTTGTGGATCAGTCCAACAGTGCTAGGGTAGAAAACGACGTCTACGCGAAAGCAGATACCGGAGACAACGACGCCAACCGCAATACAGGCGGCACGGTGTCAATCGATACCGGAGATGCAGAAACCAAAGTTGGTGTTGACAACATGATCAACTTCAACTGGGCGGACGTTGATTGCGGATGTGTTCTGGATGTTTTGGCAAAAATCGCCGGCAACGGTGACGATTCCACAAGCAAAATCGAGGCTGATCTCAAAGATGAGCTCGGTGTGTTCCAAGAGAACAGCTGTGGAGAGGAACATCGAGGAGGATTTGATTCTTTCTTCCGAAGATTTCCTTGGCACCGTGAGAAGCCGTGTTTAGAGAACGATCTCACAGCCAAAGCTGACAGCGGCGACAATGATGCCGAACGCAATACCGGTGATCCCGGAGTTGATCCGTCGGTCGAAACCGGAAATGCCTATACGGAAGTCTTGCTTGACAACTCTGGTAACTCAAACGTATACGGCAATATGCCAGACCTGGAACTTCCAGAATGGCTGGGAGGGGGCTTTTCAGTCAACATTTCGTTGGACCTGAGCGCCCTATTGGCTCTACTTGGGTTGGCATAA
PROTEIN sequence
Length: 443
MTKLQKKVATAIATGALLFNTALPAFADVTLEISGNGADTYNKAEVDVNQNRTVVQSNEANISNNVTATADTGDNDANRNTGGSVSVDTGNATTKVDVSNAANSNEAELECCEADVDVLISGNGDNSTNKVELDINDPRHHRGHDDEFLGTGIFQENEAKIDNDVTAKADTGDNDANRNTGGDVSVTTGDAKTTVDILNQANANSAKISGDGEGGSLSARILGNGADSYNKIELDYNKSVVVDQSNSARVENDVYAKADTGDNDANRNTGGTVSIDTGDAETKVGVDNMINFNWADVDCGCVLDVLAKIAGNGDDSTSKIEADLKDELGVFQENSCGEEHRGGFDSFFRRFPWHREKPCLENDLTAKADSGDNDAERNTGDPGVDPSVETGNAYTEVLLDNSGNSNVYGNMPDLELPEWLGGGFSVNISLDLSALLALLGLA*