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RifSed_csp2_16ft_2_scaffold_332018_4

Organism: RifSed_csp2_16ft_2_Abawaca2_27

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 3 ASCG 9 / 38
Location: 1361..2452

Top 3 Functional Annotations

Value Algorithm Source
atm:ANT_18690 RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor id=1246717 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 340.0
  • Bit_score: 364
  • Evalue 1.20e-97
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.2
  • Coverage: 343.0
  • Bit_score: 351
  • Evalue 2.30e-94
Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_03_49_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 363.0
  • Bit_score: 718
  • Evalue 3.60e-204

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Taxonomy

R_RIF_OP11_03_49_14 → RIF-OP11-3 → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 1092
ATGAAAGAACTCGTTCTGTCAGCTCCACAAAAAGATTTCGCCTCTGATTCGTCGAATGACTTCGAACTTGGCGAGTGGGAGGGTTGGAAACTTCCCGGTGCTTCGGATCGGTTGGCCAACCTCCTTACGGAAGGGCAGGAAAAAGGACACCTCTCAACCGATGACATCCTGTCCTCTTTCCCGCAGATCGACGAGGTCGGGCTGACAGAAATCTATGATATGTGTGATGGGCTCAACATCACCTACGCAGAAGAATCTGATGAGTCGGAAGTTGACGAAACTCAAAATGATGTGGATTCGCGTCTCGCCTCAGCATTCGATCGCACAGATACTGTTGGGCAGTATCTCAATGAAATCAGCATCGTCCCTCTCCTCACCCATAGTGAAGAAGTATCCTTGGCAAAAAGGATGGAGCAGGGGAAAAACTCGAGCCGACAAATCGCATCCGGCAACCACGCGCAAAATCACTTCCAACAATTGAAAGATGTCGTTGAAAATGCAAGACAGGCTCGCGGGCATCTCATCTCAGCAAACACCCGCCTCGTCGTCAGCGTTGCCAAAAAGTATCTCGGACGGGGTGTCCCCTTCCTCGACCTCATTCAGGAGGGAAATATCGGGCTCATCAGGGCAGCGATAAAATTCGACTATAAAAGAGGGCACAGATTCTCGACCTACGCAACCTGGTGGATTAGACAAGGTGTCACTCGTGCCATTGCGGATCAGGGGCGAACGGTCCGCGTTCCGGTTCACATGGGCGATCAAATAAATAAGATGTATAAACTCGAAAGACAAATGATGCAGGAACTGGGCAGAGATCCTTCCGACAACGAACTCGCTGCCGCTTTGCAAATCCCGACAACTAAGGTAATCAATATGAAAAAAATATCTCATCGCCCGCTCTCTTTGGAGCAACCGGTCGCTGGCCTGGACGAAGAAAGCGTCTTGGGAGACTTCATTGAGGATGAAGACAGTCTTTCTCCCCCCGATGAGGCCTCCCAAAATGAGCTGAGAGAACAGTTAAAAGAGGTATTGGGAACGCTCCCTCCCAGAGAAGTGAGAATTCTTCAGTTGCGCTATGGCCTGCTTGATTGA
PROTEIN sequence
Length: 364
MKELVLSAPQKDFASDSSNDFELGEWEGWKLPGASDRLANLLTEGQEKGHLSTDDILSSFPQIDEVGLTEIYDMCDGLNITYAEESDESEVDETQNDVDSRLASAFDRTDTVGQYLNEISIVPLLTHSEEVSLAKRMEQGKNSSRQIASGNHAQNHFQQLKDVVENARQARGHLISANTRLVVSVAKKYLGRGVPFLDLIQEGNIGLIRAAIKFDYKRGHRFSTYATWWIRQGVTRAIADQGRTVRVPVHMGDQINKMYKLERQMMQELGRDPSDNELAAALQIPTTKVINMKKISHRPLSLEQPVAGLDEESVLGDFIEDEDSLSPPDEASQNELREQLKEVLGTLPPREVRILQLRYGLLD*