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ACD41_34

Alias: ACD41_2669.22025.15

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD41_34_1

Not on your lists

2..97
DNA (96bp) protein (32aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=26)
Uncharacterized protein {ECO:0000313|EMBL:EKD79084.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_34_2

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comp(282..1319)
DNA (1038bp) protein (346aa)
BNR/Asp-box repeat-containing protein
seg (db=Seg db_id=seg from=86 to=97)
seg (db=Seg db_id=seg from=4 to=23)
Oligoxyloglucan reducing end-specific cellobiohydrolase (db=superfamily db_id=SSF110296 from=1 to=229 evalue=7.2e-26)
ACD41_34_3

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2754..2978
DNA (225bp) protein (75aa)
2754..2978 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKD79066.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_34_4

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2997..3371
DNA (375bp) protein (125aa)
seg (db=Seg db_id=seg from=108 to=121)
Uncharacterized protein {ECO:0000313|EMBL:EKD79067.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_34_5

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3477..4193
DNA (717bp) protein (239aa)
DNA alkylation repair protein
DNA_alkylation (db=HMMPfam db_id=PF08713 from=6 to=224 evalue=8.6e-57 interpro_id=IPR014825 interpro_description=DNA alkylation repair enzyme)
ARM repeat (db=superfamily db_id=SSF48371 from=10 to=227 evalue=3.1e-38 interpro_id=IPR016024 interpro_description=Armadillo-type fold GO=Molecular Function: binding (GO:0005488))
Uncharacterized protein {ECO:0000313|EMBL:EKD79068.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD41_34_6

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4305..5198
DNA (894bp) protein (298aa)
hypothetical protein
Ankyrin repeat (db=superfamily db_id=SSF48403 from=16 to=297 evalue=4.3e-54 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
no description (db=Gene3D db_id=G3DSA:1.25.40.20 from=17 to=261 evalue=1.2e-48 interpro_id=IPR020683 interpro_description=Ankyrin repeat-containing domain)
ANKYRIN REPEAT-CONTAINING (db=HMMPanther db_id=PTHR18958 from=14 to=295 evalue=5.7e-32)
ACD41_34_7

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5291..8812
DNA (3522bp) protein (1174aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=36 to=50)
seg (db=Seg db_id=seg from=92 to=105)
seg (db=Seg db_id=seg from=113 to=121)
ACD41_34_8

Not on your lists

comp(8799..9563)
DNA (765bp) protein (255aa)
transcriptional regulator TrmB
Transcriptional regulator, TrmB n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9V7_9BACT (db=UNIREF evalue=1.0e-12 bit_score=77.0 identity=37.61 coverage=45.4901960784314)
seg (db=Seg db_id=seg from=214 to=227)
seg (db=Seg db_id=seg from=157 to=168)
ACD41_34_9

Not on your lists

9644..10066
DNA (423bp) protein (141aa)
hypothetical protein
Uncharacterised conserved protein, UCP004681 type (db=HMMPIR db_id=PIRSF004681 from=1 to=140 evalue=2.2e-44 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
UPF0047 (db=HMMPfam db_id=PF01894 from=19 to=138 evalue=3.2e-39 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
YjbQ-like (db=superfamily db_id=SSF111038 from=1 to=140 evalue=9.4e-38 interpro_id=IPR001602 interpro_description=Uncharacterised protein family UPF0047)
ACD41_34_10

Not on your lists

10069..10422
DNA (354bp) protein (118aa)
carbohydrate-binding protein
RmlC-like cupins (db=superfamily db_id=SSF51182 from=29 to=117 evalue=3.4e-19 interpro_id=IPR011051 interpro_description=Cupin, RmlC-type)
no description (db=Gene3D db_id=G3DSA:2.60.120.10 from=22 to=105 evalue=4.2e-17 interpro_id=IPR014710 interpro_description=RmlC-like jelly roll fold)
Cupin_2 (db=HMMPfam db_id=PF07883 from=37 to=103 evalue=4.4e-16 interpro_id=IPR013096 interpro_description=Cupin 2, conserved barrel)
ACD41_34_11

Not on your lists

10432..10902
DNA (471bp) protein (157aa)
ribosomal RNA large subunit methyltransferase H
alpha/beta knot (db=superfamily db_id=SSF75217 from=2 to=155 evalue=9.5e-50)
Predicted methyltransferase, bacterial type (db=HMMPIR db_id=PIRSF004505 from=1 to=156 evalue=5.3e-45 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
SPOUT_MTase (db=HMMPfam db_id=PF02590 from=3 to=155 evalue=2.4e-39 interpro_id=IPR003742 interpro_description=SPOUT methyltransferase, predicted GO=Cellular Component: cytoplasm (GO:0005737), Biological Process: rRNA processing (GO:0006364), Molecular Function: methyltransferase activity (GO:0008168))
ACD41_34_12

Not on your lists

10904..11842
DNA (939bp) protein (313aa)
inner membrane protein yrbG
transmembrane_regions (db=TMHMM db_id=tmhmm from=289 to=311)
seg (db=Seg db_id=seg from=272 to=281)
transmembrane_regions (db=TMHMM db_id=tmhmm from=99 to=121)
ACD41_34_13

Not on your lists

11826..13061
DNA (1236bp) protein (412aa)
hypothetical protein
hypothetical protein cdivTM_11537 n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI0001742D15 (db=UNIREF evalue=3.0e-64 bit_score=249.0 identity=37.68 coverage=98.3009708737864)
seg (db=Seg db_id=seg from=296 to=310)
seg (db=Seg db_id=seg from=229 to=234)
ACD41_34_14

Not on your lists

13113..16496
DNA (3384bp) protein (1128aa)
peptidase S8/S53 subtilisin kexin sedolisin (EC:3.4.21.66)
seg (db=Seg db_id=seg from=521 to=533)
seg (db=Seg db_id=seg from=427 to=448)
seg (db=Seg db_id=seg from=4 to=20)
ACD41_34_15

Not on your lists

16499..16945
DNA (447bp) protein (149aa)
NUDIX hydrolase
NUDIX_BOX (db=PatternScan db_id=PS00893 from=49 to=70 evalue=0.0 interpro_id=IPR020084 interpro_description=NUDIX hydrolase, conserved site GO=Molecular Function: hydrolase activity (GO:0016787))
Nudix (db=superfamily db_id=SSF55811 from=1 to=144 evalue=4.1e-34 interpro_id=IPR015797 interpro_description=NUDIX hydrolase domain-like GO=Molecular Function: hydrolase activity (GO:0016787))
no description (db=Gene3D db_id=G3DSA:3.90.79.10 from=17 to=127 evalue=9.7e-27 interpro_id=IPR000086 interpro_description=NUDIX hydrolase domain GO=Molecular Function: hydrolase activity (GO:0016787))
ACD41_34_16

Not on your lists

16973..18580
DNA (1608bp) protein (536aa)
hypothetical protein cdiviTM7_02864 n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B2083 (db=UNIREF evalue=1.0e-29 bit_score=134.0 identity=21.7 coverage=91.6044776119403)
seg (db=Seg db_id=seg from=461 to=472)
seg (db=Seg db_id=seg from=436 to=453)
seg (db=Seg db_id=seg from=229 to=239)
ACD41_34_17

Not on your lists

18561..19670
DNA (1110bp) protein (370aa)
aspartate aminotransferase (EC:2.6.1.1)
AA_TRANSFER_CLASS_1 (db=PatternScan db_id=PS00105 from=222 to=235 evalue=0.0 interpro_id=IPR004838 interpro_description=Aminotransferases, class-I, pyridoxal-phosphate-binding site GO=Molecular Function: catalytic activity (GO:0003824), Biological Process: biosynthetic process (GO:0009058), Molecular Function: pyridoxal phosphate binding (GO:0030170))
ASPARTATE AMINOTRANSFERASE (db=HMMPanther db_id=PTHR11751:SF35 from=41 to=369 evalue=1.9e-123)
SUBGROUP I AMINOTRANSFERASE RELATED (db=HMMPanther db_id=PTHR11751 from=41 to=369 evalue=1.9e-123)
ACD41_34_18

Not on your lists

19667..20443
DNA (777bp) protein (259aa)
ATP-NAD/AcoX kinase n=1 Tax=Victivallis vadensis ATCC BAA-548 RepID=D1N9R6_9BACT (db=UNIREF evalue=9.0e-31 bit_score=137.0 identity=38.33 coverage=69.1119691119691)
ATP-NAD/AcoX kinase; K00858 NAD+ kinase [EC:2.7.1.23] (db=KEGG evalue=1.0e-09 bit_score=67.0 identity=26.05 coverage=76.8339768339768)
NAD kinase (db=superfamily db_id=SSF111331 from=10 to=232 evalue=4.8e-26 interpro_id=IPR016064 interpro_description=ATP-NAD kinase, PpnK-type GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
NAD_kinase (db=HMMPfam db_id=PF01513 from=25 to=225 evalue=1.0e-16 interpro_id=IPR002504 interpro_description=ATP-NAD/AcoX kinase GO=Molecular Function: NAD+ kinase activity (GO:0003951), Biological Process: metabolic process (GO:0008152))
ACD41_34_19

Not on your lists

20440..21000
DNA (561bp) protein (187aa)
hypothetical protein
seg (db=Seg db_id=seg from=84 to=93)
ITPase-like (db=superfamily db_id=SSF52972 from=2 to=185 evalue=7.0e-38)
Ham1p_like (db=HMMPfam db_id=PF01725 from=2 to=180 evalue=1.3e-34 interpro_id=IPR002637 interpro_description=Ham1-like protein GO=Molecular Function: hydrolase activity (GO:0016787))
ACD41_34_20

Not on your lists

20997..22061
DNA (1065bp) protein (355aa)
putative exonuclease of the beta-lactamase fold involved in RNA processing
seg (db=Seg db_id=seg from=253 to=264)
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR (db=HMMPanther db_id=PTHR11203 from=26 to=355 evalue=4.0e-68)
CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 73 KDA SUBUNIT (db=HMMPanther db_id=PTHR11203:SF11 from=26 to=355 evalue=4.0e-68)
Displaying 20 items

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