ggKbase home page

PLM4_65_coex_sep16_scaffold_70043_3

Organism: PLM4_65_coex_sep16_Liptonbacteria_48_7

partial RP 36 / 55 MC: 2 BSCG 39 / 51 MC: 1 ASCG 10 / 38
Location: 1629..2474

Top 3 Functional Annotations

Value Algorithm Source
DNA internalization-related competence protein ComEC/Rec2 bin=GWC1_OD1_38_17 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 35.3
  • Coverage: 289.0
  • Bit_score: 148
  • Evalue 6.20e-33
beta-lactamase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 252.0
  • Bit_score: 139
  • Evalue 1.40e-30
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_48_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 283.0
  • Bit_score: 275
  • Evalue 8.10e-71

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_12_48_26 → RIF-OD1-12 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGCTAAAAAACGGATATAACCTCGCAATCTTTTCGCTCGTCGCTCTAAATTCATTTTTCCTATACTTGAATTTTGGGAGCGCCGCGAGTTCCTCCGCGCTTTATTTTTTGGACGTCGGCCAGGGCGACTCAATACTCTTTGTAGCCAGGGATGGCATGAAAATTTTGACCGATGCCGGGCCGACTTCCAAAATAGAACAGAGTTTGGGAAATGTTTTGGGCAATGACCACTATTTTGATTTGGGAATAATAACCCACCAGCAACTGGACCATTTTAACGGTTTTAATTTTCTTTTTAAAACGCGCTCTTTCGGGGCGCTTTTATTTAACGGGAGGACAGACAGGGACATTCGGGAGTGGAAATTACTGGTTGCGGCGGCGAAGGAAAATAATATTCCTATGATTCCGGTTGGGGCGGGGGATAGGATTAAATCCAACGATGCGGTAATTCAAATTATTTCACCGAATAGTAATTTCGTGCAAAGCGGGGAATGGAACGATACCGGAATCGTGGAGCTCGTGAAAACAACGGATTTCTCGGCGCTCCTCACGGCAGATATCGGCCTGAACTTGGAAGCTGCAATTGCCAAATTAAATATTAAGGCCGATATCTTGAAAGTCGGGCACCATGGCTCCAAGACTTCTTCCGGAGATGTTTTACTCCAAGCCGTGGAGCCCAAAGTAGCAGGGATAGAAGTCGGAGAAAAAAATACTTATCGTCATCCCACTAAAGAAGCATTAGACCGCATAGGCAAATATACTTCGTATATTTATCGCACCGACCAGAACGGCACCATAAAAATCACGTCCAACGGCGGGAAACTTCAGATTTTTACTGAAAAATAG
PROTEIN sequence
Length: 282
MLKNGYNLAIFSLVALNSFFLYLNFGSAASSSALYFLDVGQGDSILFVARDGMKILTDAGPTSKIEQSLGNVLGNDHYFDLGIITHQQLDHFNGFNFLFKTRSFGALLFNGRTDRDIREWKLLVAAAKENNIPMIPVGAGDRIKSNDAVIQIISPNSNFVQSGEWNDTGIVELVKTTDFSALLTADIGLNLEAAIAKLNIKADILKVGHHGSKTSSGDVLLQAVEPKVAGIEVGEKNTYRHPTKEALDRIGKYTSYIYRTDQNGTIKITSNGGKLQIFTEK*