ggKbase home page
Advanced Search
Search Help

ACD43_139_2

Organism: ACD43

megabin RP 43 / 55 MC: 19 BSCG 42 / 51 MC: 12 ASCG 0 / 38
Location: comp(497..4444)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) rbh KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 999.99
  • Bit_score: 1212
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 999.99
  • Bit_score: 1212
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=5 Tax=Dehalococcoides RepID=RPOC_DEHSC (db=UNIREF evalue=0.0 bit_score=1201.0 identity=49.65 coverage=95.4407294832827) similarity UNIREF
DB: UNIREF
  • Identity: 49.65
  • Coverage: 95.44
  • Bit_score: 1201
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 3948
ATGCCAGAATATCAAGTTACCCGCACCCACGACTTCGACGCTATGCGTTTAAAAATTGCGTCCCCGGCCGAGATCCACGAATGGTCTCACGGTGAAGTCACTCGTCCAGAAACGATTAATTATCGTACTCAGAAACCAGAAAAAGACGGTTTGTTTTGTGAAAAGATTTTTGGTCCATCAAAAGATTGGGAATGTTATTGTGGAAAATATAAAAAAATACGTTACAAAGGAATTATTTGTGATAAATGTGGCGTGGAAGTCACTCGTTCAATTGTGCGCCGAGAACGTTTCGGCCATATCGATTTAGCCGCCCCCGTATCGCACATTTGGTTTTTACGTGGTGTTCCATCCAAAATTGGTTTGATCCTTGATTTATCAGTGCAGTCGTTAGAGAAGGTAATTTATTTTGCCAATTTTATTATTACGGATGTCAATGAGGAATTAAAAAATCAAGTGCTCGACCAAATTGAAAACGAAGCCAATCAAAAGCGCAAAGTTATCAAATCCGAGAATGCGCAGCTGTTGGCCAAAATGAAGCAGGACCGCGACCTGGCTGTAGCTAAAGAGACAACTGAAAGCAAACAGCGCAAAGTGGCAGAAAAACACGAAAGCGAATTGATTAATGTTTCCATTATTCGGGATGAAAAATTGAAGGATTTGGACGATGCCATCGACATGGCTAAAAAAGAATTGCGTGAATTGCGGCCAATGCAGATTATTTCCGAAACCAAGTATCAAGATTTGTCGCTTAAATATGGCCATATTTTTGAAGCCAGCATCGGTGCTGATGCGGTTTTGGAATTACTTAACCGCGTTAACCTAGACGAGTTGATTGTTGAAATGGAAAAAGAGATGGTCGAAGTCAGTAAAAATCAACAACAACGCATTATTCGTCGGTTGAAGTTGGCCAAGAACTTAAAGAGCAATAAAATTCACCCCAGTTGGATGATTATGACGGCAGTGCCTATTGTGCCACCAGATTTGCGCCCAATGGTGCAATTAGACGGTGGTCGTTTTGCTGCTTCCGATTTGAACGATTTATATCGCCGAGTAATTAACCGTAACAATCGTTTAAAGCGCTTGAAAGAATTGAACGCTCCGGAAGTAATTCAGCGCAACGAAAAACGTATGTTGCAAGAAGCCGTTGATGCTTTGATCGATAATGGAGCTCGGCATGGTAAAACCGTGACGTCTTCAACCGGTCAAAAACGTATGTTGAAGTCGTTAGCAGACATGTTGAAAGGTAAGCAAGGCCGTTTCCGACAAAACTTGTTAGGTAAACGCGTTGACTACTCTGGTCGTTCGGTGATTGTGGTTGGTCCACATTTAAAACTACATCAATGCGGTTTGCCAAAACGCATGGCGTTGGAGTTATTTAAACCGTTTGTTATTTCCAAATTGATCGAACGTGAATTTGTTTATAATGTCCGCAGCGCCAATCGGTTTATTGAATCCGGTCGCGCCGAAGTTTGGGACATTTTGGAAGAAATTACCAAGAACGCTCATGTGCTGTTGAACCGCGCTCCGACTTTGCATCGTTTGGGTATTCAGGCCTTTCAACCTGTGTTGATAGAAGGAAAAGCTATTCAAATTCATCCGTTGGTTTGTACGGCGTTCAATGCCGATTTTGATGGGGACCAAATGGCTGTCCATGTACCATTAACCGACGAAGCAAAAGAAGAAGCGGCTACATTAATGTTATCAAGTCATAACTTATTGAAGCCAGCTACCGGTGAACCAGTTGTTACACCATCACAAGATATTGTCTTGGGTTGTTACTTTATGACTTTGTTGCGTGATACGACCAAAGGTAAGAAATTATATTTTGCCGATTTCCCGGAAGTATTGCTGGCTTATCAAACCGGTCGCATCGAATTGCAAACTCGCATCTACGTTAAATATGACGATAAAATGATGGAATCATCGGCTGGTCGAATTTTATTTAATGAATTATTACCGGAAGATGTTGGTTACTTGAATCTGTTAGTCGATAAGAAAGAGCTCAAAGCCATTATTGCCCGTGTCTTCGCCGCTCATGGCAATGAACGGACAGTGGAATTGATCGATGACATCAAAGATCGCGCCATTGAATTCGTCACAAAATCTGGTATGAGCTGGGGAATGGACGACACACCGGTGTTGAAACAGAAAAAAGAAATCATGGAACGGGCGCAACTGCAAGTAGATGAGGTCTACTCGCAATATGAACTGGGTTTGTTAACCGATGATGAACGGCGAGTCCGCGTTATCGAAATCTGGACTCGAGTGAAAAACGAAATCACTGGTCTCTGTCAAAATGCGTTAGACGAAAGTACCTCGGCTTTTGCGATGATTGACTCTGGTGCTCGTGGTTCTTGGGGACAATTAACTCAGATGATGGGTATGAAAGGGTTAGTAATTAACTCTTCTGGTGAAACTATTGAGTTGCCGGTAAAAAGCTCCTTTAAAGAAGGTTTCGATGTGTTAGAATATTTCATTTCAACTCATGGCGCGCGCAAAGGTTTAACTGATACCGCGTTACGTACCGCTAATGCCGGTTACTTAACTCGTCGTTTAATTGACGTGGCGCAAGATGTTATTACGCGCGAAGAAGATTGTGGTACTAAGAATGGTCGGGCGGTTACACATGAAGAAAGTGAATCGATGGGTCAAGCGCTGTCCAGTCGCATGCTTGGTCGGGTAGTGGCGGAAGAAGTTAAAGTTGGTAATACCGTCCTCTTAAAACGCAATGAATTGGTAACCGAGAAGCATTTACCCGCTTTAGAAAAAGCTAAATTGAAGCAGGTAAAATTACGTTCGGTTTTGACTTGCGATGTCGTGCGTGGAGTCTGTCAATTATGCTATGGCTATGATTTAGGTCACAATAAAATGGTTGAACTGGGAACGGCGGTTGGTATTATTGCTGCTCAATCCATTGGTGAACCTGGCACTCAGCTGACCATGCGGACCTTCCATACTGGAGGTGTGGCCGGTGGAGACATTACCCAAGGTTTACCCCGGGTGGAAGAATTGTTTGAAGCGCGCCCGATTAAACGCAAGGCCGTGTTAAGTGATGTTGATGGTAAAGTGGCCGATGTTATAGAAACCGGTAAGCAAAAAATTATTACCATTGCGGCAGTGCGTAATACCAAAGAAATCCATCGCTTGACTAAGACCATCAAACTTAAAGTCAAAGATGGCGACATGGTAACGGCTGGTGATGAAATTGCTACGAAATCTGGCAAACCGGTAACCGCTAAAATGTCCGGTAAAGTAACGTTCACGCAAAAAGAGTTGCAAATTTTCAGCGAGCAAGAGCAGGTTTCAGAAATGCCGGTGCCCTTAGGGTACAGCGTTTGGGTGAAGCCGGGCGACTTGGTTGTAAAAGGTCAACAGCTTTGCGAAGGAAATTTGGATTTGCAAGATTTGTTTTTACTGCGCGGACATGAAGCAGTTGAACAGTATATCTTAAAAGAAATTCAATATATTTATTCTTCACAAGGTCAGAAACTAAACGACAAGCACGTTGAAACTATTGTACGGGCGATGTTCTCACGTTTCCGGGTAACCGATCCGGGTGATAGCGATTTAGTAACTGGCGATTTAGTAACGCGCGATGCTTTGCTTGAGGCTATTTTGGAAATGAAAAAAGCCGGCAAAGCAGTGCCACAGGTTGAAAATATTCTCTTGGGTATTACCAAAGCTTCATTGTCGACAGATAGTTTCTTATCGGCTGCGTCTTTCCAAGAAACCGCTCGGGTTTTAATTGATGCGGCCGTTACCGGTAAAGTTGATTACTTGCGTGGCTTAAAAGAAAATGTGATTATCGGTAAACTTATTCCGGTTGGTACTGGCTATGGTGTCGACCATGTTGCGTTGGCCGCCGAAATTGATGCCGAAGACAAACGGATCAAAGAACTACGCCAAGCGGAATCACGCGCTCGCCGTGAAGCTGAACCAAACGTTTAA
PROTEIN sequence
Length: 1316
MPEYQVTRTHDFDAMRLKIASPAEIHEWSHGEVTRPETINYRTQKPEKDGLFCEKIFGPSKDWECYCGKYKKIRYKGIICDKCGVEVTRSIVRRERFGHIDLAAPVSHIWFLRGVPSKIGLILDLSVQSLEKVIYFANFIITDVNEELKNQVLDQIENEANQKRKVIKSENAQLLAKMKQDRDLAVAKETTESKQRKVAEKHESELINVSIIRDEKLKDLDDAIDMAKKELRELRPMQIISETKYQDLSLKYGHIFEASIGADAVLELLNRVNLDELIVEMEKEMVEVSKNQQQRIIRRLKLAKNLKSNKIHPSWMIMTAVPIVPPDLRPMVQLDGGRFAASDLNDLYRRVINRNNRLKRLKELNAPEVIQRNEKRMLQEAVDALIDNGARHGKTVTSSTGQKRMLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPHLKLHQCGLPKRMALELFKPFVISKLIEREFVYNVRSANRFIESGRAEVWDILEEITKNAHVLLNRAPTLHRLGIQAFQPVLIEGKAIQIHPLVCTAFNADFDGDQMAVHVPLTDEAKEEAATLMLSSHNLLKPATGEPVVTPSQDIVLGCYFMTLLRDTTKGKKLYFADFPEVLLAYQTGRIELQTRIYVKYDDKMMESSAGRILFNELLPEDVGYLNLLVDKKELKAIIARVFAAHGNERTVELIDDIKDRAIEFVTKSGMSWGMDDTPVLKQKKEIMERAQLQVDEVYSQYELGLLTDDERRVRVIEIWTRVKNEITGLCQNALDESTSAFAMIDSGARGSWGQLTQMMGMKGLVINSSGETIELPVKSSFKEGFDVLEYFISTHGARKGLTDTALRTANAGYLTRRLIDVAQDVITREEDCGTKNGRAVTHEESESMGQALSSRMLGRVVAEEVKVGNTVLLKRNELVTEKHLPALEKAKLKQVKLRSVLTCDVVRGVCQLCYGYDLGHNKMVELGTAVGIIAAQSIGEPGTQLTMRTFHTGGVAGGDITQGLPRVEELFEARPIKRKAVLSDVDGKVADVIETGKQKIITIAAVRNTKEIHRLTKTIKLKVKDGDMVTAGDEIATKSGKPVTAKMSGKVTFTQKELQIFSEQEQVSEMPVPLGYSVWVKPGDLVVKGQQLCEGNLDLQDLFLLRGHEAVEQYILKEIQYIYSSQGQKLNDKHVETIVRAMFSRFRVTDPGDSDLVTGDLVTRDALLEAILEMKKAGKAVPQVENILLGITKASLSTDSFLSAASFQETARVLIDAAVTGKVDYLRGLKENVIIGKLIPVGTGYGVDHVALAAEIDAEDKRIKELRQAESRARREAEPNV*