ggKbase home page

QZM_A2_2_scaffold_20762_2

Organism: QZM_A2_2_Roizmanbacteria_33_54

partial RP 41 / 55 MC: 3 BSCG 35 / 51 MC: 3 ASCG 9 / 38 MC: 2
Location: comp(348..1028)

Top 3 Functional Annotations

Value Algorithm Source
lycopene cyclase Tax=Pedobacter agri RepID=UPI00029B29C6 similarity UNIREF
DB: UNIREF100
  • Identity: 30.3
  • Coverage: 231.0
  • Bit_score: 114
  • Evalue 1.00e-22
Membrane protein {ECO:0000313|EMBL:KIA89172.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 227.0
  • Bit_score: 116
  • Evalue 2.90e-23
lycopene cyclase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 32.1
  • Coverage: 234.0
  • Bit_score: 110
  • Evalue 3.30e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 681
ATGAAACTTGAATATTTGGTCTTTAATTTAATTATATTTTTCTTACCAATTTTTGCCTCATTTTTTTACCCCAAAATTAACTATCCAACAAACTTTCAAGCTTTATTTTCAATTTTTATCTCTTCATTAATATTTATTATTCATGACAATAAAGTAGCCAACAAATGGTGGCGTTTTAATAAAAGATTTATTTTAGGAATAAAAATTTTTAATTTACCGACAGAGGAAATTTTATTTTTTTTAACAGTCTCTTTTTCTTGTCTTACTCTATGGTTAAATCTTAAAAACATTTCAAATTTATCAATTAAAAATTATTTTTATGGCTCATTTCATATTCTAATCTTTATTTTTTATCATTTTTTATTTCTCAAAACAAAAAAACCTTACCCAAAATTTGTCAATTTTTTTTATTTTTTTATTTTGTTTTTTGACATTTTTTTTAAAACTCATCTTGTATTTAAACTAAATTTTTTAATTTTTATTTTAATTACTTACCTTTTAACTTTGATTTTTAATTTTTATTTAACTAAAAGACCAGTGGTTTTGTATAATGAACAATTTAAAAGTGGTTTAAAAATTTTATCAATTCCAATTGAGGATTTTTTGTATGGAATTAACTTTCTCTATTTAACAATTTTTCTCTTTGAGTTTTTATCTAATAATTCTATTTTTTTTAAATAA
PROTEIN sequence
Length: 227
MKLEYLVFNLIIFFLPIFASFFYPKINYPTNFQALFSIFISSLIFIIHDNKVANKWWRFNKRFILGIKIFNLPTEEILFFLTVSFSCLTLWLNLKNISNLSIKNYFYGSFHILIFIFYHFLFLKTKKPYPKFVNFFYFFILFFDIFFKTHLVFKLNFLIFILITYLLTLIFNFYLTKRPVVLYNEQFKSGLKILSIPIEDFLYGINFLYLTIFLFEFLSNNSIFFK*