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ERMGT100_2_curated_scaffold_3436

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ERMGT100_2_curated_scaffold_3436_1
unknown

Not on your lists

comp(1..288)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

ERMGT100_2_curated_scaffold_3436_2
R_OD1_Giovannonibacteria_44_16, Giovannonibacteria, Parcubacteria, Bacteria

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380..1279
-----------------
DNA (900bp)
protein (300aa)
transporter id=71865 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_OD1_Giovannonibacteria_44_16_curated
ERMGT100_2_curated_scaffold_3436_3
R_OD1_Nomurabacteria_38_19, Nomurabacteria, Parcubacteria, Bacteria

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comp(1354..1851)
-----------------
DNA (498bp)
protein (166aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2BQ08_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_38_19_curated
ERMGT100_2_curated_scaffold_3436_4
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists

comp(1915..2379)
-----------------
DNA (465bp)
protein (155aa)
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
ERMGT100_2_curated_scaffold_3436_5
R_SM2F11_43_13b, SM2F11, Bacteria

Not on your lists

comp(2376..2777)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein
transmembrane_regions 13..32 id=725486 bin=RAAC2_WWE3 species=RAAC2_WWE3 genus=RAAC2_WWE3 taxon_order=RAAC2_WWE3 taxon_class=RAAC2_WWE3 phylum=WWE3 tax=RAAC2_WWE3 organism_group=WWE3
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13b_curated
ERMGT100_2_curated_scaffold_3436_6
R_RIF_OD1_09_54_12, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

comp(2774..4111)
-----------------
DNA (1338bp)
protein (446aa)
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_54_12_curated
ERMGT100_2_curated_scaffold_3436_7
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

comp(4108..4515)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein id=4802742 bin=GWA2_Bacteroidetes_42_15 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
ERMGT100_2_curated_scaffold_3436_8
R_RIF_OD1_13_50_25, RIF-OD1-13, Parcubacteria, Bacteria

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comp(4487..5749)
-----------------
DNA (1263bp)
protein (421aa)
type II secretion system F domain protein; K02653 type IV pilus assembly protein PilC id=133531 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
Type II secretion system F domain protein
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_13_50_25_curated
ERMGT100_2_curated_scaffold_3436_9
R_OD1_Nomurabacteria_39_18, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5784..7004)
-----------------
DNA (1221bp)
protein (407aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YEC6_9BACT
general secretory pathway protein E
Tax=RIFCSPLOWO2_01_FULL_OD1_Nomurabacteria_39_18_curated
ERMGT100_2_curated_scaffold_3436_10
R_OD1_Yanofskybacteria_39_10, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

7263..8009
-----------------
DNA (747bp)
protein (249aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E9M9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_39_10_curated
ERMGT100_2_curated_scaffold_3436_11
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

8054..8371
-----------------
DNA (318bp)
protein (106aa)
Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
Displaying 11 items

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