ggKbase home page

GWB1_scaffold_8295_13

Organism: GWB1_OP11_41_5

partial RP 31 / 55 MC: 1 BSCG 34 / 51 MC: 2 ASCG 8 / 38 MC: 3
Location: 8399..9301

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 300.0
  • Bit_score: 584
  • Evalue 8.70e-164
RpoD subfamily RNA polymerase sigma-70 subunit KEGG
DB: KEGG
  • Identity: 36.7
  • Coverage: 297.0
  • Bit_score: 146
  • Evalue 9.30e-33
RNA polymerase sigma factor similarity UNIREF
DB: UNIREF90
  • Identity: 0.0
  • Coverage: 0.0
  • Bit_score: 156
  • Evalue 8.00e+00

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYD1_FULL_OP11_Daviesbacteria_41_10_curated → Daviesbacteria → Microgenomates → Bacteria

Sequences

DNA sequence
Length: 903
ATGCCCAAGGAAATAATACTCGAACAATACCTTGAAGAAATCGGCCGTCATCCCCTTTTAAGTGCTTGGCAGGAAATTAGGCTAAGCAAACAAATCCAATGGAGTAAATTACTTCTCAAGAGTCCCATTACCTCACCCCAATACAAAAATAAAGTTACCGGTATATATGAGAGGGCACGCACAAACCTTATTGAAAGCAATCTTAGGCTTGTCGTATCAATAGCCAAAAATAATAGACATATAGGTAGCAGCCTTAACCTACTTGATTTAATTCAAGAAGGTAATATTGGCCTAATTAGGGCGGTTGGAAAATTTGACTGGAGAAGAGGTTTAAGATTCTCAACATATGCCGATCGGTGGATTAAACAAGCTATCGGTCGTGCCATTGAAAATACCGGCAATACTATCCGGATACCAAACGGAAAACATTTGAAAATAGCAGCGCTGGTTAAAACTGAAAGTGAGCTGGACGGATCGGGACAAGGGACAACCGAGGAAGGACTTGCTGCCAAGTTGAAAATAAGTGTTGATAAAGTTAGAGAACTGAAAGAAGTAATAATACTGGCCAGGACTGCTTCTTTTTCCAAAACTGTTAAGACTACCAGGTCAACGGATACGATTAGCTTGCAGGATATCATACCCGACCGGGATGCAGATTTAGCGGAACAAGCCTATCAACACACACTTGCCGATGAATCACGGGCATTCCTGGCAAAAATCTTGACTGAAAAAGAATTCCGGAGTTTTTGGTCAAAGGCTATTCATGACCTTACATTTGCACAACAGGGTGCAATCGAAAACATTAGATACCAGGCAATTGCTTGCCGGCACTATAATGCCTTAAGAAAAATAAAAGAACCCCAAAATTTGGCCATAGTCAAACAAATAATTGGAGTTATCTAA
PROTEIN sequence
Length: 301
MPKEIILEQYLEEIGRHPLLSAWQEIRLSKQIQWSKLLLKSPITSPQYKNKVTGIYERARTNLIESNLRLVVSIAKNNRHIGSSLNLLDLIQEGNIGLIRAVGKFDWRRGLRFSTYADRWIKQAIGRAIENTGNTIRIPNGKHLKIAALVKTESELDGSGQGTTEEGLAAKLKISVDKVRELKEVIILARTASFSKTVKTTRSTDTISLQDIIPDRDADLAEQAYQHTLADESRAFLAKILTEKEFRSFWSKAIHDLTFAQQGAIENIRYQAIACRHYNALRKIKEPQNLAIVKQIIGVI*