ggKbase home page

GD18-4_B1_scaffold_748551_5

Organism: GD2018-4_B1_QB3_180703_Uhrbacteria_48_14

near complete RP 41 / 55 BSCG 46 / 51 ASCG 10 / 38 MC: 1
Location: 3318..3992

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Paenibacillus larvae subsp. larvae BRL-230010 RepID=UPI000169340D id=120514 bin=ACD76 species=Paenibacillus larvae genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1 similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 212.0
  • Bit_score: 199
  • Evalue 2.40e-48
50S ribosomal protein L4 similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 206.0
  • Bit_score: 183
  • Evalue 5.10e-44
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_03_52_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.8
  • Coverage: 213.0
  • Bit_score: 210
  • Evalue 1.90e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_03_52_15 → RIF-OD1-3 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 675
ATGGAAAACGCACCCCAAAAATTACTACTTTCAGTATATAACGTCGAGGGCAAGGTTGTAGCGGAGCGAGAATTGTCGAGCGCGGTTTTTGGCGTTGCCATAAATCCGCATGTTGTTCATTTCGCTTCCGTGGCGCATCAGGCAAACAAACGAACTGTTCTTGCCTCTACCAAGGGTCGCGGCGAAGTGCGCGGAGGAGGTAAGAAGCCATGGCGCCAAAAAGGTACGGGCCGCGCGCGGCACGGGTCTATCCGATCTCCGTTGTGGAAAGGCGGCGGTGTGGTATTCGGTCCCCGCACTGACCGTAATTATTCAATGAAGATAAATAAGAAAGTCAAGAAACAGGCGCTTACCATGGTGCTTTCCCAAAGATTTTTTGAAGGCCGCATCGTGTTGGTTGATGAATTCGCGGTGCCAGACGCAAAGACCAAGCACGCATGCGAGATATTAAAAAAATTGCCGTTGCCGGATTTTTCGAAAGGGAAAAAAGTAGGGATTATTACCGCTCCTCATTCGACGACTGTTTCGAGAAGTTTGCGCAACGTACCGAGAGTTTTTTTGCTTCCTTGTTCCAGCCTCAATGTGTATGACCTTCTTCGTGTCCCGACTGTCGTGATTCCGCTCGCAAGCGTCGACATGATCGAAAAGCACTACACGGGAAAGGAAAAAGCGTAA
PROTEIN sequence
Length: 225
MENAPQKLLLSVYNVEGKVVAERELSSAVFGVAINPHVVHFASVAHQANKRTVLASTKGRGEVRGGGKKPWRQKGTGRARHGSIRSPLWKGGGVVFGPRTDRNYSMKINKKVKKQALTMVLSQRFFEGRIVLVDEFAVPDAKTKHACEILKKLPLPDFSKGKKVGIITAPHSTTVSRSLRNVPRVFLLPCSSLNVYDLLRVPTVVIPLASVDMIEKHYTGKEKA*