ggKbase home page

B_1_S1_Biohub_coassembly_k141_1344932_5

Organism: B_1_S1_Biohub_coassembly_Liptonbacteria_53_280

near complete RP 17 / 55 BSCG 44 / 51 ASCG 9 / 38 MC: 1
Location: 4211..4876

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 28.8
  • Coverage: 177.0
  • Bit_score: 92
  • Evalue 3.20e-16
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_09_51_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.4
  • Coverage: 224.0
  • Bit_score: 253
  • Evalue 1.50e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_09_51_11 → RIF-OD1-9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGCCTGAACTTCGCACAACGTTTATACCAAAAACACCGGCATCAACGACAACTGCCGCAACTCCGCCGAAAACGGTGAACATTTTTGTTCTTGCCGCGTCTTTGGTGTTCGTTTTTTCTCTTGCCGCGGCCGGTGGCGCGTATTTTTATCGCGCGATTCTCGTCCGCGATATTGAAGAATTGTCGCGTTCGGTCACGCGCGCCGAAGAGATAGTGAGTCCGGCTCTGGTAAACCGTTTAAGCGTTTACGAAAAACGCACGCGTGCCGTAAAAACGCTTTTGGACACACACATCGTGCTTTCACCCGTGTTTGACCTCCTTGAAGCGCTCGCCATCTCAAGCGTGCGATTCAGCGATTTTAAATATTCGCTCGGACGCGAAGGGAACGCAAAACTCTCACTCTCCGGAGAAGCAAAGAGCTATTCTGCGCTTGCCGCGCAGTCAAATCTTTTGGGAAAGAGCGAATACATAAAAGAGCCGATTTTTTCAAACTTTGCCCTGAACACTATCGGAAACGTCACGTTTAATTTTTCTTCGGGCGTTGCGCATAGTTTCCAGCTGTATCGGAATACTCTTGCGAAAGAGGCGCCTGCAGCGGCTCCGCCCGCGGAAGTAAAGGCAGAAGCGGAAGAAGGGGGCGTGACAACGTCAACGAGCAGCCAATAA
PROTEIN sequence
Length: 222
MPELRTTFIPKTPASTTTAATPPKTVNIFVLAASLVFVFSLAAAGGAYFYRAILVRDIEELSRSVTRAEEIVSPALVNRLSVYEKRTRAVKTLLDTHIVLSPVFDLLEALAISSVRFSDFKYSLGREGNAKLSLSGEAKSYSALAAQSNLLGKSEYIKEPIFSNFALNTIGNVTFNFSSGVAHSFQLYRNTLAKEAPAAAPPAEVKAEAEEGGVTTSTSSQ*