ggKbase home page

S_p1_S3_coassembly_k141_1581757_3

Organism: S_p1_S3_coassembly_Berkelbacteria_44_146

partial RP 35 / 55 MC: 1 BSCG 34 / 51 MC: 1 ASCG 6 / 38
Location: comp(2040..2723)

Top 3 Functional Annotations

Value Algorithm Source
Lytic transglycosylase, catalytic bin=GWE1_ACD58_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_ACD58_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Replace with complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 190.0
  • Bit_score: 162
  • Evalue 4.40e-37
lytic transglycosylase catalytic similarity KEGG
DB: KEGG
  • Identity: 39.2
  • Coverage: 186.0
  • Bit_score: 118
  • Evalue 2.10e-24
Tax=CG_Berkel_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 43.6
  • Coverage: 227.0
  • Bit_score: 176
  • Evalue 4.10e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Berkel_02 → Berkelbacteria → Bacteria

Sequences

DNA sequence
Length: 684
ATGCGAAAACGAGTGATTATTTTTTCAATTATTTTGGTTGTTACCCTTGGCGGTTTGATTTTTTATAGATTTTTTCCCGAGATTTGGGGCGAGGCGGTTTATCCGCTGGAGCACGAAGAGGTGATTAACCGCTCGGCGAGCGAGTTTGGCATTGACCCCACTTTAATTGCCGCGGTCATTTTCCGCGAAAGCCGGTTTCATGAGACCTCGGTTTCGCGCGCCGGCGCGCGCGGCTTGATGCAGATTGTGCCGGGCACAGGCGCGGGTATTGCCAAACGCTTGGGGGTAACCAACTTTTCCGCGGACTTGCTTTTTGACCCGGTGACCAACATTCGTTTTGGCACTTCTTATTTGCGCACTCTTTATGATTCCTATGGTTCCCTTGATTTGGTGTTAGCGGCTTACAACGGCGGCGGCGCGGCCGCGAACCGGCTAAAGGAAAGCGGCAATTATAATCTTATACCGCGCGAGACCTATTTTTTCATTAACAATGTCAAATCCGCGCAGGAAATGTACGCCAAGGTTTATAGTGACCGCCTAAAATCAGTGGAAGGAGCCGCGCCGCTTACTCCAACTACTATTTCTCCTACTCCAGTCGCTCCCGCCCCCCTTCCCCCGGTCACTCTGCCTTCTTCAATCTGGCAAAAACCGCTTAAAGATATTTTGAATACGGTTTTGTTCTAA
PROTEIN sequence
Length: 228
MRKRVIIFSIILVVTLGGLIFYRFFPEIWGEAVYPLEHEEVINRSASEFGIDPTLIAAVIFRESRFHETSVSRAGARGLMQIVPGTGAGIAKRLGVTNFSADLLFDPVTNIRFGTSYLRTLYDSYGSLDLVLAAYNGGGAAANRLKESGNYNLIPRETYFFINNVKSAQEMYAKVYSDRLKSVEGAAPLTPTTISPTPVAPAPLPPVTLPSSIWQKPLKDILNTVLF*