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S_p1_S3_coassembly_k141_1031258_11

Organism: S_p1_S3_coassembly_Levybacteria_42_162

partial RP 35 / 55 BSCG 39 / 51 ASCG 5 / 38
Location: comp(8760..9413)

Top 3 Functional Annotations

Value Algorithm Source
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 188.0
  • Bit_score: 63
  • Evalue 7.50e-08
RNA polymerase sigma factor rpoD bin=GWF2_Bacteroidetes_42_66 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73 similarity UNIREF
DB: UNIREF100
  • Identity: 25.5
  • Coverage: 188.0
  • Bit_score: 59
  • Evalue 2.90e-06
Tax=GWE2_Bacteroidetes_42_39_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 25.5
  • Coverage: 188.0
  • Bit_score: 59
  • Evalue 4.10e-06

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Taxonomy

GWE2_Bacteroidetes_42_39_curated → Bacteroidia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 654
ATGAGAAATCCTGAAGCAAATAAGGGCGTTGGTACCGGTATTTCGAACGTTACTACAGGCATTACCACACCTTTTGATGTCCCGCCAAATGTACAGGCGGTTCTTTCTGCTTTTCCTGACGCTGAGTTTGCATTCATGCAACGAACAGGGAGAGAACCAGGCTTAGCTGAGCTTGTTAGCGAACTTGTCGCATTGCGAGAGCAAAAAAAGAGAACACGGGCAGAAAAGAAGGAAGAATTACCAGAAGACGCGATACGTAGGGCAGGAGAAATATTCCTTAATATGCAATATCTTCCAATAGAATACACTGTTTTTACGGGTCACGTTGATCCAGACACACTCGAGCCGATAGAGGAAACAGTAGATATAGCCATTCCAGCAGATGACTCCAGAGAGTCAGAGTTAGTTTTTGCTGGGTATCTTGCCGGATTACGACAGAGCATCGATTTGTCTCTTGCTTCCTTAACAGATAGAGAACAAGAGGTTATCCGGTCTTACTATGGTATTGGAAGAGAAAGAGAAACGACAAAAATGATCGCAGAAAGACTACACTATTCCCCTTACACAATTTCACAAATTCACAGATTTGCGCTGCACAGACTTCGCCATTCTGATCGATCAGATAGATTAGCTGCTTTTATTGATATATCGTAA
PROTEIN sequence
Length: 218
MRNPEANKGVGTGISNVTTGITTPFDVPPNVQAVLSAFPDAEFAFMQRTGREPGLAELVSELVALREQKKRTRAEKKEELPEDAIRRAGEIFLNMQYLPIEYTVFTGHVDPDTLEPIEETVDIAIPADDSRESELVFAGYLAGLRQSIDLSLASLTDREQEVIRSYYGIGRERETTKMIAERLHYSPYTISQIHRFALHRLRHSDRSDRLAAFIDIS*