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S_p2_S4_coassembly_k141_2957069

Search features with annotation key words

Displaying items 61-90 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
S_p2_S4_coassembly_k141_2957069_trna_1
unknown

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60909..60983
DNA (75bp)
transferRNA Glu
S_p2_S4_coassembly_k141_2957069_59
unknown

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61027..61548
DNA (522bp) protein (174aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2957069_60
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

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61564..62688
DNA (1125bp) protein (375aa)
group 1 glycosyl transferase; K08256 phosphatidylinositol alpha-mannosyltransferase [EC:2.4.1.57] bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
group 1 glycosyl transferase
Tax=RBG_16_RIF_WS3X_71_46_curated
S_p2_S4_coassembly_k141_2957069_61
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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62685..63395
DNA (711bp) protein (237aa)
LmbE family protein Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SMD4_THEM7
LmbE family protein
LmbE family protein {ECO:0000313|EMBL:ADU51493.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM; 10246 / 7p75a).;"
S_p2_S4_coassembly_k141_2957069_62
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

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63495..73493
DNA (9999bp) protein (3333aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZIZ3_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:KKW13563.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
conserved protein of unknown function; RTX toxins and related Ca2+-binding domain
S_p2_S4_coassembly_k141_2957069_63
R_OD1_Nomurabacteria_38_15, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

73622..74719
DNA (1098bp) protein (366aa)
transmembrane_regions bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Tax=RIFCSPHIGHO2_02_FULL_OD1_Nomurabacteria_38_15_curated
S_p2_S4_coassembly_k141_2957069_64
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

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74747..75757
DNA (1011bp) protein (337aa)
hypothetical protein Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000381E4C7
exported protein of unknown function
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S_p2_S4_coassembly_k141_2957069_65
R_RIF_OD1_01_48_11, RIF-OD1-1, Parcubacteria, Bacteria

Not on your lists

75761..76615
DNA (855bp) protein (285aa)
Uncharacterized protein Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZK4_9BACT
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_01_48_11_curated
S_p2_S4_coassembly_k141_2957069_66
RBG_13_RIF_OD1_07_36_15_curated, RIF-OD1-7, Parcubacteria, Bacteria

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76603..77721
DNA (1119bp) protein (373aa)
id=3012470 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Tax=RBG_13_RIF_OD1_07_36_15_curated
S_p2_S4_coassembly_k141_2957069_67
RHI_OD1_44_17, Parcubacteria, Bacteria

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77741..79159
DNA (1419bp) protein (473aa)
alias=gwe2_scaffold_23_152 bin=bin11_novelCP species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=bin11_novelCP organism_group=Unknown_CP
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_OD1_44_17_curated
S_p2_S4_coassembly_k141_2957069_68
RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated, Falkowbacteria, Parcubacteria, Bacteria

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79156..80805
DNA (1650bp) protein (550aa)
id=2169405 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
hypothetical protein
Tax=RIFOXYA2_FULL_OD1_Falkowbacteria_47_19_curated
S_p2_S4_coassembly_k141_2957069_69
R_OD1_Falkowbacteria_56_16, Falkowbacteria, Parcubacteria, Bacteria

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80899..81591
DNA (693bp) protein (231aa)
Transcriptional regulator of heat shock protein Tax=uncultured bacterium RepID=K2FSA4_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_56_16_curated
S_p2_S4_coassembly_k141_2957069_70
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

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81588..82133
DNA (546bp) protein (182aa)
Protein GrpE bin=GWA1_ZB2_49_26 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
GrpE protein HSP-70 cofactor
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
S_p2_S4_coassembly_k141_2957069_71
RIFOXYC2_FULL_RIF_OD1_03_42_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

Not on your lists

82207..82614
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2ENH0_9BACT
heat shock protein Hsp20
Tax=RIFOXYC2_FULL_RIF_OD1_03_42_11_curated
S_p2_S4_coassembly_k141_2957069_72
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

82758..83078
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K2EW92_9BACT
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
S_p2_S4_coassembly_k141_2957069_73
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

83114..84967
DNA (1854bp) protein (618aa)
chaperone protein DnaK (EC:1.3.1.74)
Chaperone protein DnaK {ECO:0000313|EMBL:KKW14728.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
ddf:DEFDS_2114 molecular chaperone DnaK; K04043 molecular chaperone DnaK bin=ACD8 species=ACD8 genus=ACD8 taxon_order=ACD8 taxon_class=ACD8 phylum=OD1-i tax=ACD8 organism_group=OD1-i organism_desc=OD1-i
S_p2_S4_coassembly_k141_2957069_74
GWF2_OD1_45_11, Parcubacteria, Bacteria

Not on your lists

comp(85175..85537)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M650_GEODF
Uncharacterized protein {ECO:0000313|EMBL:KKT89975.1}; Flags: Fragment;; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_45_11.;"
hypothetical protein
S_p2_S4_coassembly_k141_2957069_75
Pseudomonas extremaustralis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(85901..86230)
DNA (330bp) protein (110aa)
hypothetical protein Tax=Pseudomonas extremaustralis RepID=UPI0002896DDC
Uncharacterized protein {ECO:0000313|EMBL:EZI27371.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas extremaustralis 14-3 substr. 14-3b.;"
hypothetical protein
S_p2_S4_coassembly_k141_2957069_76
GWA2_OD1_45_30, Parcubacteria, Bacteria

Not on your lists

86370..86900
DNA (531bp) protein (177aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037B297C
Uncharacterized protein {ECO:0000313|EMBL:KKU05128.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_45_30.;"
shikimate kinase I
S_p2_S4_coassembly_k141_2957069_77
R_Saccharibacteria_47_12, Candidatus Saccharibacteria, Bacteria

Not on your lists

87145..87648
DNA (504bp) protein (168aa)
NUDIX hydrolase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN56_9BACT
NUDIX hydrolase
Tax=RIFCSPHIGHO2_02_FULL_Saccharibacteria_47_12_curated
S_p2_S4_coassembly_k141_2957069_78
R_RIF_OD1_13_60_25, RIF-OD1-13, Parcubacteria, Bacteria

Not on your lists

comp(87665..88906)
DNA (1242bp) protein (414aa)
hypothetical protein bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
ATP-dependent RNA helicase RhlE
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_13_60_25_curated
S_p2_S4_coassembly_k141_2957069_79
RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

88928..89572
DNA (645bp) protein (215aa)
Thiamine triphosphatase-like protein Tax=uncultured bacterium RepID=K2FD97_9BACT
Tax=RIFOXYB2_FULL_OD1_Uhrbacteria_57_15_curated
S_p2_S4_coassembly_k141_2957069_80
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

89600..89992
DNA (393bp) protein (131aa)
peptide-methionine (R)-S-oxide reductase (EC:1.8.4.12)
methionine-R-sulfoxide reductase (EC:1.8.4.12); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:KKW16735.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
S_p2_S4_coassembly_k141_2957069_81
GWA2_OD1_53_10, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

89989..90756
DNA (768bp) protein (256aa)
OsmC-like protein family protein {ECO:0000313|EMBL:KKW32127.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWA2_53_10.;"
putative hydrolase bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
S_p2_S4_coassembly_k141_2957069_82
R_OP11_Curtissbacteria_42_26, Curtissbacteria, Microgenomates, Bacteria

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90965..91237
DNA (273bp) protein (91aa)
Endo/excinuclease amino domain protein Tax=Filifactor alocis ATCC 35896 RepID=D6GRY9_9FIRM bin=ACD52 species=Filifactor alocis genus=Filifactor taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=ACD52 organism_group=OP11 (Microgenomates) organism_desc=OP11
excinuclease ABC C subunit domain-containing protein
Tax=RIFCSPLOWO2_01_FULL_OP11_Curtissbacteria_42_26_curated
S_p2_S4_coassembly_k141_2957069_83
unknown

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comp(91403..91651)
DNA (249bp) protein (83aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2957069_84
unknown

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comp(91682..91990)
DNA (309bp) protein (103aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2957069_85
unknown

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92008..92157
DNA (150bp) protein (50aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2957069_86
unknown

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92350..92622
DNA (273bp) protein (91aa)

This feature has no annotations

S_p2_S4_coassembly_k141_2957069_87
unknown

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92619..93092
DNA (474bp) protein (158aa)

This feature has no annotations

Displaying items 61-90 of 110 in total

View Taxonomy