ggKbase home page

S5_GD2017_2_S2_scaffold_5920_5

Organism: GD2017-2_S2_QB3_180125_Parcubacteria_47_8

near complete RP 39 / 55 MC: 1 BSCG 42 / 51 ASCG 10 / 38 MC: 1
Location: 1601..3343

Top 3 Functional Annotations

Value Algorithm Source
general secretion pathway protein E bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 58.3
  • Coverage: 581.0
  • Bit_score: 680
  • Evalue 1.20e-192
type II secretion system protein E similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 564.0
  • Bit_score: 403
  • Evalue 6.30e-110
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_45_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 61.8
  • Coverage: 584.0
  • Bit_score: 714
  • Evalue 8.20e-203

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_11_45_35 → RIF-OD1-11 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 1743
ATGGGCTTTTTAGAATTTCTTGCAAAAAAAGAAGCCATTTCTGCGGAAGACTTCGCACACTTGGAAGATGTGGCTCGCACACAAGGCGTTGGTATTGAACAGCTCTTGATAAAACAAGGGGTTGTTTCCGGCGACATGCTTCTGCAATTTAAGGGGGAGTATTTCAATCTGCCTATTCGCTCCAGTGCGGATGTCCAGGTGCCCGCGGAAATACAAAAACAAATACCCCAAGAATCTTCCCTGCACTATAAATTCGCCGCGGTCGGCATGAAGGACGGCGTCCTTGAAGTCGGAGTTGTGGATCCCGACAACATAGACGCGATGGATGCCATTCAATTCATATCTTCAAAAATAGGCGTTCCGTTTAAGGTATTCCTTGTTTCCGAAGAAGACTTTACGAATATCATCAATGGTCGGGGCGGCATAACAGGCGAGGTGAGCAGCGCCTTATCCGAACTTCAGCAAGATTTCAATGTCGATGATCTTCCGAAAGAGGGGGCGGAGGCAGAGGACATTGATGCGATGAAAGCGACGAGCGCCGCAGAGAAAGGAAAAACCATCATTGAGGATGCGCCGGTGACAAAGATGGTTGCGGTGATTTTGCGCCATGCGACGGAAGGAAATGCGTCGGATATTCATATAGAGAATATGGGTGAAAAAATACGCGTCCGTTTTCGCGTGGACGGCACTCTTCACACCAGTCTTCTTCTGCCGGCAAACGTTCATTCGGCAATAGTTTCCCGCATAAAGATCCTTGCAAGTCTGAAACTCGATGAGAAAAGAAAACCTCAGGACGGTCGTTTTTCTGCGCGCATTGATAAAAGGAAAATAGACTTCCGCGTTTCAACGCTTCCCGCATACTATGGGGAAAAAGTCGTGATGAGAATCCTCGATTCGGAAAAAGGCGTACTTTCCCTTGCTTCTCTCGGTATGGGAGAAAAAGACCTGGGGGCGGTACGAGAGGCTATTGCGCGCCCATACGGCATGATTCTTCTCACCGGTCCGACGGGTTCCGGAAAGTCAACCACGCTGTATGCCATGTTGAATGAACTCGATCGCGACAGTGATAATGTTGTGAGTCTTGAAGATCCGGTCGAGTACAGCATGCCGGGAGTGAATCAATCCCAAGTGCGGCCGGAGATCGACTATACTTTTGCAAGCGGTCTGCGTTCTATCTTGCGGCAAGACCCCGACATTATCATGGTGGGCGAAATACGAGACAAAGAGACGGCGCAGCTTGCGGTGCAGGCGGCCCTGACCGGACACCTCGTGTTCTCAACGCTTCACACGAACACCGCGACAGGCGTCATTCCCCGTTTGATAGACATGGGGGTTGATCCGTATCTTATAGCGCCGACGCTTCTTTTGGCGATTGGGCAGCGGCTCGTTACAAAACTCTGCCCGGGAGCGGGGAAAAGCATTCCGCTTTCGGACTCGCTCCGCATGCTCATAGAAAAAGATCTTGCGGATCTCTCCGAGGTTCACAAAAAGAATATTCCGATACCGGATGCGGTTTATGAAGCAACGCCCACCTCTGACTGTCCGTCGGGAACCCGAGGGCGTCTGGCGGTTTTTGAACTGTTAAAAATAGACCAGGATCTTCAGCAGATCATACTGAAAAATCCGACTGAACCCGATGTCTATAAGGTGGCGCGCAGCAAGGGGATGCTGACCATGAAAGAAGACGCTATGCTGAAAGCTTTCAATGGACTTATTCCATTTGTAGAAGTGAATAAATTGTAA
PROTEIN sequence
Length: 581
MGFLEFLAKKEAISAEDFAHLEDVARTQGVGIEQLLIKQGVVSGDMLLQFKGEYFNLPIRSSADVQVPAEIQKQIPQESSLHYKFAAVGMKDGVLEVGVVDPDNIDAMDAIQFISSKIGVPFKVFLVSEEDFTNIINGRGGITGEVSSALSELQQDFNVDDLPKEGAEAEDIDAMKATSAAEKGKTIIEDAPVTKMVAVILRHATEGNASDIHIENMGEKIRVRFRVDGTLHTSLLLPANVHSAIVSRIKILASLKLDEKRKPQDGRFSARIDKRKIDFRVSTLPAYYGEKVVMRILDSEKGVLSLASLGMGEKDLGAVREAIARPYGMILLTGPTGSGKSTTLYAMLNELDRDSDNVVSLEDPVEYSMPGVNQSQVRPEIDYTFASGLRSILRQDPDIIMVGEIRDKETAQLAVQAALTGHLVFSTLHTNTATGVIPRLIDMGVDPYLIAPTLLLAIGQRLVTKLCPGAGKSIPLSDSLRMLIEKDLADLSEVHKKNIPIPDAVYEATPTSDCPSGTRGRLAVFELLKIDQDLQQIILKNPTEPDVYKVARSKGMLTMKEDAMLKAFNGLIPFVEVNKL*