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ACD13_116

Alias: ACD13_13376.7300.20

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD13_116_1

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200..1108
DNA (909bp) protein (303aa)
histidyl-tRNA synthetase
HISTIDYL-TRNA SYNTHETASE (db=HMMPanther db_id=PTHR11476 from=6 to=302 evalue=1.5e-84 interpro_id=IPR004516 interpro_description=Histidyl-tRNA synthetase, class IIa GO=Molecular Function: nucleotide binding (GO:0000166), Molecular Function: histidine-tRNA ligase activity (GO:0004821), Molecular Function: ATP binding (GO:0005524), Cellular Component: cytoplasm (GO:0005737), Biological Process: translation (GO:0006412), Biological Process: histidyl-tRNA aminoacylation (GO:0006427))
no description (db=Gene3D db_id=G3DSA:3.30.930.10 from=5 to=301 evalue=2.1e-77)
Class II aaRS and biotin synthetases (db=superfamily db_id=SSF55681 from=4 to=301 evalue=1.3e-66)
ACD13_116_2

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1157..2086
DNA (930bp) protein (310aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=100 to=117)
transmembrane_regions (db=TMHMM db_id=tmhmm from=126 to=148)
transmembrane_regions (db=TMHMM db_id=tmhmm from=152 to=174)
ACD13_116_3

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2141..2455
DNA (315bp) protein (105aa)
50S ribosomal protein L31
RIBOSOMAL_L31 (db=PatternScan db_id=PS01143 from=35 to=56 evalue=0.0 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L31: ribosomal protein L31 (db=HMMTigr db_id=TIGR00105 from=1 to=67 evalue=2.0e-27 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Ribosomal_L31 (db=HMMPfam db_id=PF01197 from=1 to=65 evalue=1.8e-23 interpro_id=IPR002150 interpro_description=Ribosomal protein L31 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_116_4

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2506..3204
DNA (699bp) protein (233aa)
Peptide chain release factor 1
RF_PROK_I (db=PatternScan db_id=PS00745 from=113 to=129 evalue=0.0 interpro_id=IPR000352 interpro_description=Class I peptide chain release factor GO=Molecular Function: translation release factor activity (GO:0003747), Biological Process: translational termination (GO:0006415))
PEPTIDE CHAIN RELEASE FACTOR 1 (db=HMMPanther db_id=PTHR11075:SF9 from=7 to=226 evalue=1.6e-102)
PEPTIDE CHAIN RELEASE FACTOR (db=HMMPanther db_id=PTHR11075 from=7 to=226 evalue=1.6e-102)
ACD13_116_5
GWB1_OP11_40_12_partial, Woesebacteria, Microgenomates, Bacteria

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comp(3360..4397)
DNA (1038bp) protein (346aa)
Trypsin
protease Do n=1 Tax=candidate division TM7 single-cell isolate TM7a RepID=UPI000174268D (db=UNIREF evalue=5.0e-47 bit_score=191.0 identity=52.4 coverage=59.2485549132948)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
seg (db=Seg db_id=seg from=315 to=330)
ACD13_116_6

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comp(4433..5668)
DNA (1236bp) protein (412aa)
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=35)
prc: C-terminal processing peptidase (db=HMMTigr db_id=TIGR00225 from=70 to=409 evalue=3.7e-85 interpro_id=IPR004447 interpro_description=Peptidase S41A, C-terminal peptidase GO=Biological Process: proteolysis (GO:0006508), Molecular Function: serine-type peptidase activity (GO:0008236))
ClpP/crotonase (db=superfamily db_id=SSF52096 from=41 to=396 evalue=1.1e-65)
ACD13_116_7

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comp(5713..5970)
DNA (258bp) protein (86aa)
hypothetical protein
seg (db=Seg db_id=seg from=3 to=13)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479:SF16 from=10 to=85 evalue=1.9e-22)
30S RIBOSOMAL PROTEIN S18 (db=HMMPanther db_id=PTHR13479 from=10 to=85 evalue=1.9e-22 interpro_id=IPR001648 interpro_description=Ribosomal protein S18 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD13_116_8

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comp(5997..6467)
DNA (471bp) protein (157aa)
hypothetical protein
coiled-coil (db=Coil db_id=coil from=131 to=153 evalue=NA)
seg (db=Seg db_id=seg from=125 to=152)
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=156 evalue=6.4e-44 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
ACD13_116_9

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comp(6493..6780)
DNA (288bp) protein (96aa)
Ribosomal protein S6 n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L4M1_RUMHA (db=UNIREF evalue=4.0e-11 bit_score=70.5 identity=37.23 coverage=96.875)
SSU ribosomal protein S6P
Ribosomal_S6 (db=HMMPfam db_id=PF01250 from=2 to=93 evalue=3.5e-20 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
Ribosomal protein S6 (db=superfamily db_id=SSF54995 from=1 to=95 evalue=9.8e-19 interpro_id=IPR000529 interpro_description=Ribosomal protein S6 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412), Molecular Function: rRNA binding (GO:0019843))
ACD13_116_10

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comp(6838..7338)
DNA (501bp) protein (167aa)
GTP-binding protein YchF
GTP-BINDING PROTEIN-RELATED (db=HMMPanther db_id=PTHR23305 from=1 to=166 evalue=8.6e-71)
GTP-BINDING PROTEIN (db=HMMPanther db_id=PTHR23305:SF4 from=1 to=166 evalue=8.6e-71 interpro_id=IPR004396 interpro_description=Conserved hypothetical protein CHP00092 GO=Molecular Function: GTP binding (GO:0005525))
no description (db=Gene3D db_id=G3DSA:3.10.20.30 from=60 to=163 evalue=1.8e-38 interpro_id=IPR012675 interpro_description=Beta-grasp fold, ferredoxin-type)
Displaying 10 items

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