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07m_4_2014_Parcubacteria_38_152

In projects: 07m_4_2014  |  cpr-dpann-all  |  all_cpr_genomes  |  ggK_CPR

Consensus taxonomy: Parcubacteria  →  Bacteria

Description

Intersect_07M_2014.013_&_07M_2014.055

Displaying items 51-68 of 68 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
07M_4_2014_scaffold_6350
Domain: Bacteria (58.33%)
24 13953 bp 37.71 123.56 82.87
07M_4_2014_scaffold_10689
Phylum: Parcubacteria (64.29%)
14 14773 bp 36.73 149.92 74.65
07M_4_2014_scaffold_3838
Domain: Bacteria (65.52%)
29 14802 bp 35.75 154.58 78.19
07M_4_2014_scaffold_4792
Phylum: Parcubacteria (55%)
20 15634 bp 37.23 154.72 88.19
07M_4_2014_scaffold_1830
Phylum: Parcubacteria (75%)
12 17315 bp 38.42 151.33 77.97
07M_4_2014_scaffold_1836
Phylum: Parcubacteria (75%)
12 17694 bp 39.83 156.67 90.12
07M_4_2014_scaffold_4970
Domain: Bacteria (79.17%)
24 18720 bp 37.58 154.53 84.59
07M_4_2014_scaffold_1681
Phylum: Parcubacteria (65.22%)
23 20373 bp 39.17 156.69 83.52
07M_4_2014_scaffold_6581
Domain: Bacteria (75%)
24 21173 bp 37.15 148.42 69.47
07M_4_2014_scaffold_2158
Phylum: Parcubacteria (70%)
20 21681 bp 37.89 159.92 82.93
07M_4_2014_scaffold_2106
Phylum: Parcubacteria (64.52%)
31 21703 bp 37.94 157.05 79.29
07M_4_2014_scaffold_3217
Domain: Bacteria (70%)
20 22168 bp 39.27 150.68 90.70
07M_4_2014_scaffold_1976
Phylum: Parcubacteria (57.89%)
19 26211 bp 39.43 144.37 83.15
07M_4_2014_scaffold_1229
Phylum: Parcubacteria (51.85%)
27 26261 bp 37.39 153.50 83.56
07M_4_2014_scaffold_1511
Domain: Bacteria (70.97%)
31 28168 bp 38.08 153.56 79.68
07M_4_2014_scaffold_2000
Phylum: Parcubacteria (55.88%)
34 36251 bp 37.48 157.17 90.30
07M_4_2014_scaffold_1993
Domain: Bacteria (80%)
25 37293 bp 40.43 156.76 84.64
07M_4_2014_scaffold_1548
Domain: Bacteria (79.07%)
43 44821 bp 38.09 158.93 88.18
Displaying items 51-68 of 68 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.