ggKbase home page

07M_4_2014_scaffold_8171_5

Organism: 07m_4_2014_OD1-related_38_178

near complete RP 37 / 55 BSCG 43 / 51 ASCG 10 / 38
Location: 1680..1958

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein id=4684831 bin=GWA2_OP3_53_43 species=Faecalibacterium prausnitzii genus=Faecalibacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3 similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 89.0
  • Bit_score: 99
  • Evalue 2.40e-18
Tax=RIFCSPLOWO2_02_FULL_RIF_OD1_01_42_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 92.0
  • Bit_score: 156
  • Evalue 1.40e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_RIF_OD1_01_42_19 → RIF-OD1-1 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 279
ATGAGAAAAGTCGATGATTATATTAAGGAAAAACTCAAAAGGAATCCGAATTTTAAAGCTCGCTGCGATTTGCTCGTAGAGAAGGCAGCGGTGGTGAAGAAAATTATTGCCTACCGTATCCGACATAAATTATCCCAGGAGCGACTCGCCAAAGAACTTGGTGTAACTCAACAGTACATTTCCAAGATTGAAGAAGGTGAGTTTTCTAATCTGGATGCTATTGAGGACATCCTTGAGCAAATCGGATATAGGTTGAAGTTAGAAGTGGTCCCAGGATGA
PROTEIN sequence
Length: 93
MRKVDDYIKEKLKRNPNFKARCDLLVEKAAVVKKIIAYRIRHKLSQERLAKELGVTQQYISKIEEGEFSNLDAIEDILEQIGYRLKLEVVPG*