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bjp_ig3402_scaffold_5724_1

Organism: BJP_IG3402_Parcubacteria_38_279

near complete RP 36 / 55 MC: 1 BSCG 44 / 51 ASCG 7 / 38
Location: comp(3..485)

Top 3 Functional Annotations

Value Algorithm Source
Triple helix repeat-containing collagen {ECO:0000313|EMBL:KKT08919.1}; TaxID=1618746 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_43_20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 140.0
  • Bit_score: 96
  • Evalue 3.80e-17
id=2823862 bin=GWC1_OD1_38_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation similarity UNIREF
DB: UNIREF100
  • Identity: 30.4
  • Coverage: 148.0
  • Bit_score: 81
  • Evalue 1.20e-12

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Taxonomy

GWB1_OD1_43_20 → Nomurabacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGCAAATTATCAAAGAATCAGTAAAAACAATAATTATCTGCTTTGTTTTGGTCGCAGGTGTTAATTTGGTTTATGCCTGGACAGGACCAACTGCGGCGCCTCCAGGAGGCAATGTTCCTGCGCCGATTAATGTGAGCAATGTTTCTCAGATTAAATCAGGAGCATTGCAAGTTAATGGTTTTCGCAATCTTGGCACCACAATTCTTGACGGCAACGTCGGCATCGGGACGACGGGGCCAGGACAGAAATTGGATATAGCAGGTGGGCACCTAAAAATATCTACAGCCGGGTACGGTCTATTGCTGCCCGGTTCAGTCAACACAGATGCTCAGATTAATTTTGTTGCTGCCGGCGCCACAGGGGAAAATAAACTAGCCAACTTCCCGCTGTATAATAACTCAATTTTTCTTAAGTCGGCATCAGATAAATTGTACTTCTACTCCGATAAAGGTTCGGTTGGCAACTTCTTGTCATTAACAACT
PROTEIN sequence
Length: 161
MQIIKESVKTIIICFVLVAGVNLVYAWTGPTAAPPGGNVPAPINVSNVSQIKSGALQVNGFRNLGTTILDGNVGIGTTGPGQKLDIAGGHLKISTAGYGLLLPGSVNTDAQINFVAAGATGENKLANFPLYNNSIFLKSASDKLYFYSDKGSVGNFLSLTT