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ACD49_3

Alias: ACD49_39878.259358.21

Search features with annotation key words

Displaying items 61-90 of 232 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD49_3_61

Not on your lists

comp(60560..61033)
DNA (474bp) protein (158aa)
RfaE bifunctional protein n=1 Tax=Methanocaldococcus fervens AG86 RepID=C7P721_METFA (db=UNIREF evalue=4.0e-33 bit_score=143.0 identity=49.36 coverage=98.1012658227848)
rfaE bifunctional protein
no description (db=Gene3D db_id=G3DSA:3.40.50.620 from=21 to=152 evalue=4.1e-30 interpro_id=IPR014729 interpro_description=Rossmann-like alpha/beta/alpha sandwich fold)
Nucleotidylyl transferase (db=superfamily db_id=SSF52374 from=21 to=152 evalue=3.2e-26)
ACD49_3_62
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(61102..62391)
DNA (1290bp) protein (430aa)
ATPase
ATPase
Putative ATPase n=1 Tax=Bacteroides vulgatus ATCC 8482 RepID=A6KYE9_BACV8 (db=UNIREF evalue=1.0e-88 bit_score=330.0 identity=43.33 coverage=97.9069767441861)
seg (db=Seg db_id=seg from=149 to=163)
ACD49_3_63
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(62508..63512)
DNA (1005bp) protein (335aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=301 to=323)
transmembrane_regions (db=TMHMM db_id=tmhmm from=274 to=296)
transmembrane_regions (db=TMHMM db_id=tmhmm from=215 to=237)
transmembrane_regions (db=TMHMM db_id=tmhmm from=178 to=200)
ACD49_3_64
ACD49, Gracilibacteria, Bacteria

Not on your lists

63666..65207
DNA (1542bp) protein (514aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=22)
seg (db=Seg db_id=seg from=6 to=15)
seg 6..15 Tax=ACD49
ACD49_3_65
ACD49, Gracilibacteria, Bacteria

Not on your lists

65292..65936
DNA (645bp) protein (215aa)
seg (db=Seg db_id=seg from=12 to=24)
seg (db=Seg db_id=seg from=200 to=212)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
seg 12..24 Tax=ACD49
ACD49_3_66
ACD49, Gracilibacteria, Bacteria

Not on your lists

65962..69405
DNA (3444bp) protein (1148aa)
seg (db=Seg db_id=seg from=1013 to=1029)
seg (db=Seg db_id=seg from=176 to=189)
seg (db=Seg db_id=seg from=3 to=20)
seg 3..20 Tax=ACD49
ACD49_3_67

Not on your lists

69468..70250
DNA (783bp) protein (261aa)
hypothetical protein
sufC: FeS assembly ATPase SufC (db=HMMTigr db_id=TIGR01978 from=2 to=246 evalue=2.4e-71 interpro_id=IPR010230 interpro_description=ATPase SufC, SUF system FeS cluster assembly GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
ATP BINDING CASSETE (ABC) TRANSPORTER (db=HMMPanther db_id=PTHR19222 from=2 to=223 evalue=7.0e-66)
ABC TRANSPORTER (db=HMMPanther db_id=PTHR19222:SF6 from=2 to=223 evalue=7.0e-66 interpro_id=IPR010230 interpro_description=ATPase SufC, SUF system FeS cluster assembly GO=Molecular Function: ATP binding (GO:0005524), Biological Process: transport (GO:0006810))
ACD49_3_68
ACD49, Gracilibacteria, Bacteria

Not on your lists

70254..71615
DNA (1362bp) protein (454aa)
FeS assembly protein SufB
FeS assembly protein SufB
FeS assembly protein SufB n=8 Tax=Thermoanaerobacter RepID=B0K560_THEPX (db=UNIREF evalue=2.0e-126 bit_score=456.0 identity=50.34 coverage=97.3568281938326)
seg (db=Seg db_id=seg from=336 to=347)
ACD49_3_69
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(71484..71912)
DNA (429bp) protein (143aa)
seg (db=Seg db_id=seg from=72 to=82)
seg (db=Seg db_id=seg from=87 to=103)
transmembrane_regions (db=TMHMM db_id=tmhmm from=4 to=22)
seg 72..82 Tax=ACD49
ACD49_3_70
ACD49, Gracilibacteria, Bacteria

Not on your lists

72008..72610
DNA (603bp) protein (201aa)
UPF0051 (db=HMMPfam db_id=PF01458 from=46 to=168 evalue=2.4e-10 interpro_id=IPR000825 interpro_description=SUF system FeS cluster assembly, SufBD GO=Molecular Function: protein binding (GO:0005515), Biological Process: iron-sulfur cluster assembly (GO:0016226))
Stabilizer of iron transporter SufD (db=superfamily db_id=SSF101960 from=98 to=198 evalue=3.1e-08)
UPF0051 46..168 Tax=ACD49
ACD49_3_71
ACD49, Gracilibacteria, Bacteria

Not on your lists

72694..72990
DNA (297bp) protein (99aa)
excinuclease ABC subunit C
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=24)
GIY-YIG endonuclease (db=superfamily db_id=SSF82771 from=6 to=94 evalue=5.2e-11 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
GIY-YIG (db=HMMPfam db_id=PF01541 from=9 to=77 evalue=1.7e-05 interpro_id=IPR000305 interpro_description=Excinuclease ABC, C subunit, N-terminal GO=Molecular Function: nuclease activity (GO:0004518), Cellular Component: intracellular (GO:0005622), Biological Process: DNA repair (GO:0006281))
ACD49_3_72

Not on your lists

73277..74485
DNA (1209bp) protein (403aa)
putative cysteine desulfurase
seg (db=Seg db_id=seg from=145 to=160)
seg (db=Seg db_id=seg from=93 to=113)
AA_TRANSFER_CLASS_5 (db=PatternScan db_id=PS00595 from=211 to=230 evalue=0.0 interpro_id=IPR020578 interpro_description=Aminotransferase class-V pyridoxal-phosphate binding site)
ACD49_3_73
ACD49, Gracilibacteria, Bacteria

Not on your lists

74584..74931
DNA (348bp) protein (116aa)
seg (db=Seg db_id=seg from=66 to=78)
transmembrane_regions (db=TMHMM db_id=tmhmm from=33 to=55)
seg 66..78 Tax=ACD49
ACD49_3_74
ACD49, Gracilibacteria, Bacteria

Not on your lists

74934..75638
DNA (705bp) protein (235aa)
hypothetical protein
SNARE associated Golgi protein n=1 Tax=Herpetosiphon aurantiacus ATCC 23779 RepID=A9B1K0_HERA2 (db=UNIREF evalue=7.0e-19 bit_score=97.4 identity=32.82 coverage=81.7021276595745)
transmembrane_regions (db=TMHMM db_id=tmhmm from=85 to=107)
transmembrane_regions (db=TMHMM db_id=tmhmm from=206 to=224)
ACD49_3_75
ACD49, Gracilibacteria, Bacteria

Not on your lists

75680..76429
DNA (750bp) protein (250aa)
75680..76429 + (rbs_motif=TTTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD49
ACD49_3_76
unknown

Not on your lists

comp(76539..77144)
DNA (606bp) protein (202aa)
nucleotidyltransferase domain-containing protein
probable transcriptional regulator n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3 (db=UNIREF evalue=3.0e-13 bit_score=78.6 identity=32.28 coverage=89.6039603960396)
coiled-coil (db=Coil db_id=coil from=38 to=59 evalue=NA)
probable transcriptional regulator n=1 Tax=candidate division TM7 single-cell isolate TM7c RepID=UPI00016B25B3 Tax=ACD49
ACD49_3_77
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(77184..78299)
DNA (1116bp) protein (372aa)
group 1 glycosyl transferase
UDP-Glycosyltransferase/glycogen phosphorylase (db=superfamily db_id=SSF53756 from=2 to=369 evalue=1.0e-70)
GLYCOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526 from=2 to=369 evalue=1.2e-68)
MANNOSYLTRANSFERASE (db=HMMPanther db_id=PTHR12526:SF29 from=2 to=369 evalue=1.2e-68)
ACD49_3_78
ACD49, Gracilibacteria, Bacteria

Not on your lists

78372..78638
DNA (267bp) protein (89aa)
DUF167 (db=HMMPfam db_id=PF02594 from=12 to=85 evalue=1.9e-17 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
YggU-like (db=superfamily db_id=SSF69786 from=1 to=86 evalue=1.8e-14 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
no description (db=Gene3D db_id=G3DSA:3.30.1200.10 from=5 to=85 evalue=5.8e-12 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
UPF0235 (db=HAMAP db_id=MF_00634 from=10 to=88 evalue=12.871 interpro_id=IPR003746 interpro_description=Protein of unknown function DUF167)
ACD49_3_79
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(78642..82475)
DNA (3834bp) protein (1278aa)
seg (db=Seg db_id=seg from=1268 to=1274)
seg (db=Seg db_id=seg from=1250 to=1265)
seg (db=Seg db_id=seg from=656 to=667)
seg (db=Seg db_id=seg from=263 to=277)
ACD49_3_80
ACD49, Gracilibacteria, Bacteria

Not on your lists

82678..83025
DNA (348bp) protein (116aa)
82678..83025 + (rbs_motif=TTTAA rbs_spacer=9bp)
hypothetical protein Tax=ACD49
ACD49_3_81
ACD49, Gracilibacteria, Bacteria

Not on your lists

83031..83465
DNA (435bp) protein (145aa)
coiled-coil (db=Coil db_id=coil from=76 to=97 evalue=NA)
seg (db=Seg db_id=seg from=80 to=96)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil 76..97 Tax=ACD49
ACD49_3_82
ACD49, Gracilibacteria, Bacteria

Not on your lists

83475..83999
DNA (525bp) protein (175aa)
SUA5/YciO/YrdC/YwlC family protein (db=KEGG evalue=1.0e-11 bit_score=72.0 identity=28.78 coverage=77.1428571428572)
Sua5_yciO_yrdC (db=HMMPfam db_id=PF01300 from=2 to=144 evalue=3.9e-22 interpro_id=IPR006070 interpro_description=Sua5/YciO/YrdC, N-terminal)
YrdC/RibB (db=superfamily db_id=SSF55821 from=2 to=167 evalue=2.4e-21 interpro_id=IPR017945 interpro_description=DHBP synthase RibB-like alpha/beta domain)
SUA5 (db=HMMPanther db_id=PTHR17490 from=2 to=167 evalue=3.7e-18)
ACD49_3_83
ACD49, Gracilibacteria, Bacteria

Not on your lists

84014..84970
DNA (957bp) protein (319aa)
hypothetical protein
seg (db=Seg db_id=seg from=4 to=16)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
YceG (db=HMMPfam db_id=PF02618 from=53 to=317 evalue=7.6e-50 interpro_id=IPR003770 interpro_description=Uncharacterised protein family YceG-like)
ACD49_3_84
ACD49, Gracilibacteria, Bacteria

Not on your lists

85075..85350
DNA (276bp) protein (92aa)
85075..85350 + (rbs_motif=TTTTA rbs_spacer=11bp)
hypothetical protein Tax=ACD49
ACD49_3_85
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(85347..87368)
DNA (2022bp) protein (674aa)
penicillin-binding protein
seg (db=Seg db_id=seg from=2 to=13)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
coiled-coil (db=Coil db_id=coil from=220 to=241 evalue=NA)
ACD49_3_86

Not on your lists

87416..93976
DNA (6561bp) protein (2187aa)
alpha-2-macroglobulin domain-containing protein
seg (db=Seg db_id=seg from=1942 to=1955)
seg (db=Seg db_id=seg from=1400 to=1411)
seg (db=Seg db_id=seg from=29 to=40)
ACD49_3_87
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(93969..94409)
DNA (441bp) protein (147aa)
conserved hypothetical metalloprotease
seg (db=Seg db_id=seg from=134 to=146)
seg (db=Seg db_id=seg from=6 to=22)
seg (db=Seg db_id=seg from=86 to=97)
ACD49_3_88
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(94478..96760)
DNA (2283bp) protein (761aa)
hypothetical protein (db=KEGG evalue=5.0e-07 bit_score=60.5 identity=31.15 coverage=23.2588699080158)
transmembrane_regions (db=TMHMM db_id=tmhmm from=171 to=192)
seg (db=Seg db_id=seg from=743 to=757)
seg (db=Seg db_id=seg from=528 to=545)
ACD49_3_89
ACD49, Gracilibacteria, Bacteria

Not on your lists

96890..97138
DNA (249bp) protein (83aa)
hypothetical protein
DUF37 (db=HMMPfam db_id=PF01809 from=3 to=78 evalue=7.2e-20 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
Y1462_THEMA_Q9X1H3; (db=BlastProDom db_id=PD004225 from=27 to=78 evalue=4.0e-10 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
TIGR00278: conserved hypothetical protein Y (db=HMMTigr db_id=TIGR00278 from=6 to=81 evalue=1.6e-09 interpro_id=IPR002696 interpro_description=Protein of unknown function DUF37)
ACD49_3_90
ACD49, Gracilibacteria, Bacteria

Not on your lists

comp(97135..98292)
DNA (1158bp) protein (386aa)
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
transmembrane_regions 7..29 Tax=ACD49
Displaying items 61-90 of 232 in total

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