ggKbase home page

ACD49_6_64

Organism: ACD49

near complete RP 49 / 55 MC: 11 BSCG 47 / 51 ASCG 0 / 38
Location: 79498..80367

Top 3 Functional Annotations

Value Algorithm Source
pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 37.3
  • Coverage: 287.0
  • Bit_score: 155
  • Evalue 3.20e-35
Pseudouridine synthase (db=superfamily db_id=SSF55120 from=2 to=232 evalue=1.0e-49 interpro_id=IPR020103 interpro_description=Pseudouridine synthase, catalytic domain GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 1.00e-49
TruB: tRNA pseudouridine synthase B (db=HMMTigr db_id=TIGR00431 from=2 to=215 evalue=4.9e-42 interpro_id=IPR014780 interpro_description=Pseudouridine synthase II, TruB, N-terminal, bacterial-type GO=Biological Process: pseudouridine synthesis (GO:0001522), Molecular Function: RNA binding (GO:0003723), Biological Process: RNA modification (GO:0009451), Molecular Function: pseudouridine synthase activity (GO:0009982)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 4.90e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

ACD49 → Gracilibacteria → Bacteria

Sequences

DNA sequence
Length: 870
ATGTTTTATCTAATTAACAAACCTATTTGAATTTCGAGTTTTTTCGCAATATCAAAACTGAGAAAAATTCTTAATATCAAAAAAGTAGGTCACACTGGCACTCTTGACCCACTAGCTTCGGGTCTTTTATTGGTGGCTACTGGTAATTCTACAAAATTAATAAGCTACCTTGATAAAGCTAGAAAAACTTATGTTTTTTCTTTTAATCTAGATTGATATACCGAAAGCGGAGATCTTGGAACAGAAGTTCATTATCTAGACAAGAAACTAATAAAAGAAACTCAAAAAAATATTACAAAAGAGAAAATCCAAAATTTAATTGAGTCTAAATTCCTCTGAAAAATATCCCAGATTCCACCGAAATATAGCGCAATAAAAGTAAATTGAAAAAGGGCCTATAGCCTAGCCAGAGATTGAAAAGAAGTACAAATCCCAGAAAGAACTGTTGAGATATTTGACTATAAATTATTAGATTATAACTTCCCTACTATATCGCTTCAGATGACCGTATCTGCCTGAACCTATATCCGCACTATTGCAGAAGATATCTGAAAAGAATTATGATTAAATGCCTATACCATCGCACTCCACAGATCCAAAATCTGAGAACTAGATGAATCAAAATCTGTAGAGATTGAAAATCTCAAAGAAACCGATTCAATCCCCTATTCTCACTTATTCCAAGATTTTAAAGAAATAATTCTAGACCCAGAAAATATCTCAAAAATCTCATCTTGAATAATACTCGAAAATAAATTCTCACTAATTGAATGAGGAAAATATTTTATAAAAAATGAAAATTGAGAATATATCTCACTAATTGAAGTAAAAAATAATAAATTAGTTATTATTGCTAATAAAATCTATTAA
PROTEIN sequence
Length: 290
MFYLINKPIGISSFFAISKLRKILNIKKVGHTGTLDPLASGLLLVATGNSTKLISYLDKARKTYVFSFNLDGYTESGDLGTEVHYLDKKLIKETQKNITKEKIQNLIESKFLGKISQIPPKYSAIKVNGKRAYSLARDGKEVQIPERTVEIFDYKLLDYNFPTISLQMTVSAGTYIRTIAEDIGKELGLNAYTIALHRSKIGELDESKSVEIENLKETDSIPYSHLFQDFKEIILDPENISKISSGIILENKFSLIEGGKYFIKNENGEYISLIEVKNNKLVIIANKIY*