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ACD14_42_1

Organism: ACD14

partial RP 2 / 55 BSCG 4 / 51 ASCG 0 / 38
Location: comp(516..1283)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 190.0
  • Bit_score: 125
  • Evalue 1.90e-26
sigma70-ECF: RNA polymerase sigma factor, (db=HMMTigr db_id=TIGR02937 from=85 to=249 evalue=7.1e-44 interpro_id=IPR014284 interpro_description=RNA polymerase sigma-70 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.15e-44
Sigma2 domain of RNA polymerase sigma factors (db=superfamily db_id=SSF88946 from=64 to=175 evalue=5.5e-23 interpro_id=IPR013325 interpro_description=RNA polymerase sigma factor, region 2 GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: transcription factor activity (GO:0003700), Biological Process: transcription initiation (GO:0006352), Biological Process: regulation of transcription, DNA-dependent (GO:0006355), Molecular Function: sigma factor activity (GO:0016987)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.50e-23

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Taxonomy

GWC2_OD1-i_37_82 → Moranbacteria → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 768
ATGGTATTGAAAGTGAAAAGTCTACCCCCCGGTAGACTGACAATTAAAATTAAGAAACCGGTAGGTGGGCGGTCAATTTTGCTTCGTCGCAAGACTGATTCTATGTGGCAATCTTCTGACAAGCAGACAATATTAGTAAAGCCAATTGTTATTGATGAATCCCTTCTATTTTATCGCAGAAATACTGACCTTGAACGCTGCGCTGATTTATCTGACAGTGAGCTTATAAAAGTGATTCACACTCAAAACAGGGAAGCATATAAGGAGCTTTTCGCTCGCTATCAAAAAAAACTTTTCACCTATATTTTTCACTTGGTTGGTAATAAGGACGAAACCGAAGATATCTTGCAGAGTGTTTTTCAAAAAACATTTAAAAACATCGAGCATTTTGACACTTCAAGAAAATTTTCATCTTGGATTTATCGTATCGCGCACAATGAAGCTGTGAATTTTCTCAAACGAAGAAGTAAAAGGCGCATGGTTTCGTGGGATGATATAGCAACCAGTAAAGATAAGCTGGAAACGGCAACCAATGATGAGCCTTTGGAAGATAAATTTATGCGTCAGGAAGTAGTTAAAGAGATTGATGATGCGCTAGATACATTGCCAAAAAAATATCAACAAGTTTTGAAGCTTAGATATTTTCAGGAATATTCTTATGATGTTATCAGTGGAATTTTGAATAAACCTGTGAACACGGTTGGAACATTGATTAATAGGGCTAAGAAGAAATTGCTGGAAGTCGTGGAGCAGGGGAATAAGAAATAG
PROTEIN sequence
Length: 256
MVLKVKSLPPGRLTIKIKKPVGGRSILLRRKTDSMWQSSDKQTILVKPIVIDESLLFYRRNTDLERCADLSDSELIKVIHTQNREAYKELFARYQKKLFTYIFHLVGNKDETEDILQSVFQKTFKNIEHFDTSRKFSSWIYRIAHNEAVNFLKRRSKRRMVSWDDIATSKDKLETATNDEPLEDKFMRQEVVKEIDDALDTLPKKYQQVLKLRYFQEYSYDVISGILNKPVNTVGTLINRAKKKLLEVVEQGNKK*