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ACD15_44

Alias: ACD15_14670.26413.17

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Displaying items 31-41 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD15_44_31

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comp(18887..19153)
DNA (267bp) protein (89aa)
hypothetical protein
Cdd1 (db=HMMPfam db_id=PF11731 from=5 to=88 evalue=7.5e-28 interpro_id=IPR021725 interpro_description=Pathogenicity locus)
hypothetical protein alias=ACD15_C00044G00031,ACD15_14670.26413.17G0031,ACD15_14670.26413.17_31 id=8836 tax=ACD15 species=Clostridium methylpentosum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes organism_group=OD1-i organism_desc=OD1-i
Uncharacterized protein {ECO:0000313|EMBL:EKE11642.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_44_32

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comp(19176..19340)
DNA (165bp) protein (55aa)
Putative uncharacterized protein n=1 Tax=Rhodobacterales bacterium HTCC2654 RepID=A3VB26_9RHOB (db=UNIREF evalue=2.0e-08 bit_score=61.6 identity=58.0 coverage=89.0909090909091)
transmembrane_regions (db=TMHMM db_id=tmhmm from=13 to=32)
transmembrane_regions (db=TMHMM db_id=tmhmm from=36 to=53)
Uncharacterized protein {ECO:0000313|EMBL:EKE11643.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_44_33

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comp(19411..19644)
DNA (234bp) protein (78aa)
seg (db=Seg db_id=seg from=60 to=74)
Uncharacterized protein {ECO:0000313|EMBL:EKE11644.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_44_34

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comp(19832..20245)
DNA (414bp) protein (138aa)
coiled-coil (db=Coil db_id=coil from=106 to=134 evalue=NA)
Uncharacterized protein {ECO:0000313|EMBL:EKE11645.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_44_35

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20650..21243
DNA (594bp) protein (198aa)
20650..21243 + (rbs_motif=None rbs_spacer=None)
Uncharacterized protein {ECO:0000313|EMBL:EKE11646.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_44_36

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comp(21328..21486)
DNA (159bp) protein (53aa)
DUF3276 (db=HMMPfam db_id=PF11680 from=1 to=51 evalue=1.8e-08 interpro_id=IPR021694 interpro_description=Protein of unknown function DUF3276)
Uncharacterized protein {ECO:0000313|EMBL:EKE11647.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
ACD15_44_37

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comp(21768..23858)
DNA (2091bp) protein (697aa)
Translation elongation factor 2 (EF-2/EF-G) n=1 Tax=Pelobacter propionicus DSM 2379 RepID=A1ALT8_PELPD (db=UNIREF evalue=0.0 bit_score=952.0 identity=65.52 coverage=98.9956958393113)
translation elongation factor 2 (EF-2/EF-G)
translation elongation factor 2 (EF-2/EF-G)
EFACTOR_GTP (db=PatternScan db_id=PS00301 from=51 to=66 evalue=0.0 interpro_id=IPR000795 interpro_description=Protein synthesis factor, GTP-binding GO=Molecular Function: GTPase activity (GO:0003924), Molecular Function: GTP binding (GO:0005525))
ACD15_44_38

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comp(23931..24398)
DNA (468bp) protein (156aa)
30S ribosomal protein S7
RIBOSOMAL_S7 (db=PatternScan db_id=PS00052 from=20 to=46 evalue=0.0 interpro_id=IPR020606 interpro_description=Ribosomal protein S7, conserved site GO=Molecular Function: RNA binding (GO:0003723), Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412))
rpsG_bact: ribosomal protein S7 (db=HMMTigr db_id=TIGR01029 from=3 to=154 evalue=5.4e-74 interpro_id=IPR005717 interpro_description=Ribosomal protein S7, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal_S7 (db=HMMPfam db_id=PF00177 from=1 to=149 evalue=2.4e-57 interpro_id=IPR000235 interpro_description=Ribosomal protein S7 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD15_44_39

Not on your lists


comp(24490..24909)
DNA (420bp) protein (140aa)
30S ribosomal protein S12
RIBOSOMAL_S12 (db=PatternScan db_id=PS00055 from=56 to=63 evalue=0.0 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
rpsL_bact: ribosomal protein S12 (db=HMMTigr db_id=TIGR00981 from=1 to=137 evalue=6.5e-83 interpro_id=IPR005679 interpro_description=Ribosomal protein S12, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935))
Ribosomal protein, S12p/S12a/S23e/organellar S12 types (db=HMMPIR db_id=PIRSF002133 from=1 to=137 evalue=9.3e-69 interpro_id=IPR006032 interpro_description=Ribosomal protein S12/S23 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
ACD15_44_40

Not on your lists

comp(25045..25740)
DNA (696bp) protein (232aa)
transmembrane protein
seg (db=Seg db_id=seg from=199 to=211)
seg (db=Seg db_id=seg from=5 to=17)
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=34)
ACD15_44_41

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25828..26001
DNA (174bp) protein (58aa)
Ribosomal_L28 (db=HMMPfam db_id=PF00830 from=3 to=55 evalue=6.1e-15 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28: ribosomal protein L28 (db=HMMTigr db_id=TIGR00009 from=1 to=52 evalue=1.0e-14 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
L28p-like (db=superfamily db_id=SSF143800 from=1 to=57 evalue=2.4e-13)
Ribosomal_L28 (db=HAMAP db_id=MF_00373 from=1 to=56 evalue=13.28 interpro_id=IPR001383 interpro_description=Ribosomal protein L28 GO=Molecular Function: structural constituent of ribosome (GO:0003735), Cellular Component: intracellular (GO:0005622), Cellular Component: ribosome (GO:0005840), Biological Process: translation (GO:0006412))
Displaying items 31-41 of 41 in total

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