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ACD15_3_12

Organism: ACD15

near complete RP 50 / 55 MC: 14 BSCG 47 / 51 MC: 5 ASCG 0 / 38
Location: comp(8648..9205)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 200.0
  • Bit_score: 156
  • Evalue 7.20e-36
RIBOSOMAL_S4 (db=PatternScan db_id=PS00632 from=76 to=100 evalue=0.0 interpro_id=IPR018079 interpro_description=Ribosomal protein S4, conserved site GO=Cellular Component: intracellular (GO:0005622), Molecular Function: rRNA binding (GO:0019843)) iprscan interpro
DB: PatternScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 0.0
rpsD_bact: ribosomal protein S4 (db=HMMTigr db_id=TIGR01017 from=3 to=185 evalue=7.1e-64 interpro_id=IPR005709 interpro_description=Ribosomal protein S4, bacterial-type GO=Molecular Function: structural constituent of ribosome (GO:0003735), Biological Process: translation (GO:0006412), Cellular Component: small ribosomal subunit (GO:0015935)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.10e-64

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCCAAACACATTGGACCAAAAAAGAAATATCTGCGCCGCTTCGGGCTTCTGCCGGGAAAATCCCGCCAAGAAAAATTGCGAGCCAAATCTGAATATGGAAAGCGATTGGAAGAGAAGCAGAAACTTAAATTCATATACGGCGTAACAGAAAAACAATTTCTCCGCCATGTTAGAAATGCTCAAAAATCCAGAGGAAACTACGGCGAGCTAGTTCTCCAGCAATTAGAAGCGCGCTTGGACAACGTCGTCTATCGCTTAGGCTATGCCAAGACCAGAGAACAAGCAAGACAAATCGTATCCCATGAACATGTTTTAGTTGACGATAAAAAAGTCACTATCCCCTCTTACCAAGTGAGTGCCGGACAAAAAATTGCTATCAAAGAAAAGATGTTTCAAAATCCTTTGATTCAGGATGCTATGAAAGAAAAGAAAATAGGAGATTTGCCAGGCTGGCTTGAAAGAAAAGAAAGTTCTGCAATCATAAGGCATTTTCCCCAATCAGATGATCTTCCCAAAGATATAAATATGAGTTTAATTTTAGAATTTTATAGATGA
PROTEIN sequence
Length: 186
MAKHIGPKKKYLRRFGLLPGKSRQEKLRAKSEYGKRLEEKQKLKFIYGVTEKQFLRHVRNAQKSRGNYGELVLQQLEARLDNVVYRLGYAKTREQARQIVSHEHVLVDDKKVTIPSYQVSAGQKIAIKEKMFQNPLIQDAMKEKKIGDLPGWLERKESSAIIRHFPQSDDLPKDINMSLILEFYR*