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ACD68_12_2

Organism: ACD68

partial RP 19 / 55 MC: 3 BSCG 19 / 51 MC: 2 ASCG 0 / 38
Location: 2160..2723

Top 3 Functional Annotations

Value Algorithm Source
putative 2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 28.2
  • Coverage: 188.0
  • Bit_score: 83
  • Evalue 6.00e-14
LigT-like (db=superfamily db_id=SSF55144 from=4 to=185 evalue=3.4e-30 interpro_id=IPR009097 interpro_description=RNA ligase/cyclic nucleotide phosphodiesterase GO=Molecular Function: catalytic activity (GO:0003824), Cellular Component: intracellular (GO:0005622), Biological Process: RNA metabolic process (GO:0016070)) iprscan interpro
DB: superfamily
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.40e-30
no description (db=Gene3D db_id=G3DSA:3.90.1140.10 from=5 to=185 evalue=6.9e-27) iprscan interpro
DB: Gene3D
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 6.90e-27

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 564
ATGAATACTAAAAGGTTGTTTTTGGGGTTAGATTTGCCTTCCGATATAAAACTGGCTATTACCTCTGTCATTAAAAAACTGGGCCTGGCGTTTGTAGGAGTAGCTTGGGTACCTGAAAATAATTTGCATGTGACTTTAGTTTTTTTGGGACAAGTGGCAGAAAAAACAATTTCTTTGCTGAAAACCAAATTAGCAACCGTCAAACCGGATTTTCCGCCATTTATGATGAGTACTCACGTTATCAAAGCCTTCCCCAATTGGGAAAAGTGCCAAGTGATAATAATAGAATTAGCCAATAATCCGTTTTTTAATAAATTGGTTGAACAATATCAACAAACGCTAAAACAAATACCGGAAATTAAAATGGCCATTAGGCGAAATATTACTCCCCACATCACTATCGGACGGGTGAAAAAGGAATTGTTGGTTATAGAAAAGAACCAACCGTCAGAGATGCCTAAACTAAAATGGGAAATTAATAGCGTTACTCTTTATGAAAGCCGTTTGCAAAACAATCAGCCGCCAAAATATTTACCTTTAGAAAATTATCATATCAGTGAATGA
PROTEIN sequence
Length: 188
MNTKRLFLGLDLPSDIKLAITSVIKKLGLAFVGVAWVPENNLHVTLVFLGQVAEKTISLLKTKLATVKPDFPPFMMSTHVIKAFPNWEKCQVIIIELANNPFFNKLVEQYQQTLKQIPEIKMAIRRNITPHITIGRVKKELLVIEKNQPSEMPKLKWEINSVTLYESRLQNNQPPKYLPLENYHISE*